Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Bacillus coagulans 36D1

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coagulans 36D1
Orthologous TF(s) No orthologous TFs found
Regulated genes 15
Built upon 304 sites [see more]
Predicted regulatory interactions in Bacillus coagulans 36D1
Locus tag Position Score Sequence
Position: -161
Score: 4.4
Sequence: TGTCAAAAAAGTTGACA
Locus tag: BcoaDRAFT_1580
BcoaDRAFT_1580 -161 4.4 TGTCAAAAAAGTTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Bacillus pumilus SAFR-032 BPUM_1922 -162 5 GGTCAGATTTTATGACA
Bacillus licheniformis DSM 13 BLi02324 -248 4.5 TGTAATAAAATATCACT
Anoxybacillus flavithermus WK1 Aflv_1238 -19 4.1 TGTCATTTTATTTTAAA
1 4.3 TGTTACAATGTTTAACA
Geobacillus kaustophilus HTA426 GK2046 -177 4.9 TGTAAGAAATTATGACG
Position: -56
Score: 4.1
Sequence: TTTCAGTTAATTTCACA
Position: -46
Score: 4.3
Sequence: TTTCACAAATTATGCCA
Locus tag: BcoaDRAFT_0347
BcoaDRAFT_0347 -56 4.1 TTTCAGTTAATTTCACA
-46 4.3 TTTCACAAATTATGCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclF
Ortholog function: Di-tripeptide-proton ABC symporter
Bacillus subtilis subsp. subtilis str. 168 BSU03670 -212 3.6 TCTAAAATTTTATTAAA
-175 4.9 TGTAAGAAAATCTCACG
Bacillus amyloliquefaciens FZB42 RBAM_003840 -211 3.4 CTTTAAATTTTATTAAA
-174 4.9 AGTCAGATAATATAACA
Bacillus pumilus SAFR-032 BPUM_0343 -183 3.8 TTAAATAAATTCTTTCA
-141 3.7 TGAAAGAATTTTTCATA
Bacillus licheniformis DSM 13 BLi00449 -180 3.9 TATTAAAAAATCTTTCA
Geobacillus kaustophilus HTA426 GK2020 -44 3.5 TGAATTATTATATTAAA
Position: -318
Score: 3.4
Sequence: GGTTATATTATAGCAAA
Locus tag: BcoaDRAFT_1335
BcoaDRAFT_1335 -318 3.4 GGTTATATTATAGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnQ
Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Bacillus subtilis subsp. subtilis str. 168 BSU27430 -28 4 GGTCAAATTTTCTGATA
Bacillus amyloliquefaciens FZB42 RBAM_024530 -123 3.5 TATCAGAAATTACGAAA
Bacillus pumilus SAFR-032 BPUM_2382 -93 3.8 TGTTAAAAATGAATACA
Bacillus clausii KSM-K16 ABC0770 -8 3.4 GGACAGCAATGATCACA
Paenibacillus sp. JDR-2 Pjdr2_2874 -63 4.7 TGTTATCTAACCTAACA
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