Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex regulog to Bacillus coagulans 36D1

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coagulans 36D1
Orthologous TF(s) BcoaDRAFT_2536
Regulated genes 4
Built upon 64 sites [see more]
Predicted regulatory interactions in Bacillus coagulans 36D1
Locus tag Position Score Sequence
Position: -50
Score: 5.5
Sequence: TTTGTGATATGATTCACAAT
Locus tag: BcoaDRAFT_1490
BcoaDRAFT_1490 -50 5.5 TTTGTGATATGATTCACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -66 6.4 ATTGTGAAATACTTCACAAT
Bacillus licheniformis DSM 13 BLi04135 -89 6.2 TTTGTGAAATGTTTCACAAT
Anoxybacillus flavithermus WK1 Aflv_1436 -43 4.9 AGTGTGAAAAACATCACAAA
Bacillus cereus ATCC 14579 BC1308 -103 6.1 TTTGTGAAACATTGCACAAA
Position: -305
Score: 5
Sequence: TTTGTGAAATATTGAGCATG
Position: -75
Score: 5.3
Sequence: AATGTTCACTATTTAACAAA
Locus tag: BcoaDRAFT_1492
BcoaDRAFT_1492 -305 5 TTTGTGAAATATTGAGCATG
-75 5.3 AATGTTCACTATTTAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Bacillus licheniformis DSM 13 BLi02132 -119 6 TTTGTTAACTATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2793 -117 5 TTTGATCAACTTTTCACAAA
Bacillus cereus ATCC 14579 BC0491 -129 5.5 TTTGCTCAACATTTCACAAA
Position: -26
Score: 4.9
Sequence: ATCGTGAATAAAATCACAAA
Locus tag: BcoaDRAFT_1034
BcoaDRAFT_1034 -26 4.9 ATCGTGAATAAAATCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh2
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Bacillus licheniformis DSM 13 BLi03392 -119 4.9 AAAGTGAAGGGTTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2402 -76 5.5 TTCGTGAATAAATTCACAAA
Geobacillus kaustophilus HTA426 GK2953 -102 5.6 AACGTGAATTATTTCACAAA
Bacillus clausii KSM-K16 ABC2924 -55 4.8 AAAGTGAAATGAATCACAAA
Paenibacillus sp. JDR-2 Pjdr2_4834 -64 5.7 ATTGTGTAATTTTTCACAAA
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