Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Bacillus coagulans 36D1

Reference regulog properties
Source regulog: Fnr - Bacillales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coagulans 36D1
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacillus coagulans 36D1
Locus tag Position Score Sequence
Position: -48
Score: 5.3
Sequence: TGTGATATGATTCACA
Locus tag: BcoaDRAFT_1490
BcoaDRAFT_1490 -48 5.3 TGTGATATGATTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -64 6 TGTGAAATACTTCACA
Bacillus licheniformis DSM 13 BLi04135 -87 5.3 TGTGAAATGTTTCACA
Anoxybacillus flavithermus WK1 Aflv_1436 -41 5.3 TGTGAAAAACATCACA
Position: -81
Score: 6
Sequence: TGTGAAATACTTCACA
Position: -43
Score: 5.4
Sequence: TGTGAAATTATTCACA
Locus tag: BcoaDRAFT_2625
BcoaDRAFT_2625 -81 6 TGTGAAATACTTCACA
-43 5.4 TGTGAAATTATTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adh
Ortholog function: NAD-dependent aldehyde dehydrogenase domain and Fe-dependent alcohol dehydrogense domain
Bacillus licheniformis DSM 13 BLi04290 -90 5.3 TGTGAAATGTTTCACA
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