Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Exiguobacterium sp. AT1b

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 5 11
TF BglR Beta-glucoside-6-phosphate Beta-glucosides utilization 2 2
TF BirA Biotin Biotin biosynthesis 1 1
TF CcpA HPr, phosphocarrier protein Carbon catabolism 24 26
TF CcpC Citrate Citrate metabolism 1 1
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 13 21
TF CtsR Heat shock Heat shock response 1 1
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 1 1
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 4 6
TF FapR Malonyl-CoA Fatty acid biosynthesis 3 3
TF Fnr Oxygen Anaerobic metabolism 2 2
TF Fur Iron ion, (Fe2+) Iron homeostasis 4 7
TF GamR Glucosamine-6-phosphate Glucosamine utilization 2 2
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 2 3
TF HisR Histidine Histidine biosynthesis 1 1
TF HrcA Heat shock Heat shock response 3 3
TF LexA DNA damage SOS response 5 10
TF MhqR 2-Methylhydroquinone and catechol resistance 2 3
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NiaR Niacin NAD biosynthesis 2 3
TF NsrR Nitric oxide Nitrosative stress response 1 1
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 6 8
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 7 10
TF Rex NADH Energy metabolism 2 3
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 8 12
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF YodB/CatR Diamide; Quinone Oxidative stress response 1 1
TF YrkD Multidrug resistance 2 2
TF YtrA Ramoplanin Ramoplanin resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 2
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