Propagation of TnrA regulog to Exiguobacterium sp. AT1b
| Source regulog: | TnrA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor (activator) |
| Biological process: | Nitrogen assimilation |
| Effector: | NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Exiguobacterium sp. AT1b |
| Orthologous TF(s) | EAT1b_2462 |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 1
Score: 4.1 Sequence: TGTTACAAAAAGTCACG
Locus tag: EAT1b_0595
|
||||
| EAT1b_0595 | 1 | 4.1 | TGTTACAAAAAGTCACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recO | ||||
| Ortholog function: DNA recombination and repair protein RecO | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU25280 | -135 | 4.3 | TGTGTCATTATCTCACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_023580 | -310 | 4.9 | TGTGAGATTACCTCACA |
| Bacillus pumilus SAFR-032 | BPUM_2260 | -134 | 5.5 | TGTCATAAAATCTGACA |
| Bacillus licheniformis DSM 13 | BLi02719 | -166 | 4.1 | TGGAATGTATTTTCACA |
| Geobacillus kaustophilus HTA426 | GK2486 | -100 | 4.2 | GGTTAGAAAATTTTACG |
| Bacillus halodurans C-125 | BH1369 | -216 | 4.4 | TGCAAGAAAATGTCACA |
|
Position: -97
Score: 5.7 Sequence: TGTCAGATAATCTGACA
Locus tag: EAT1b_2461
|
||||
| EAT1b_2461 | -97 | 5.7 | TGTCAGATAATCTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrgA | ||||
| Ortholog function: Ammonium transporter | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1332 | -112 | 4.6 | TGTCATGAAAAATAACA |
| -49 | 4.8 | TGTAATATATTATAACC | ||
| -27 | 5 | TGTTATAAAAAATGACA | ||
| Geobacillus kaustophilus HTA426 | GK1452 | -124 | 4.4 | TGTTAAGAAATTTAACA |
| -48 | 5.4 | TGTTATATATTATGACA | ||
| Bacillus halodurans C-125 | BH3834 | -138 | 4 | TGTCAGATATAGGCACA |
| -113 | 4.9 | TGTCTGATTATCTGACA | ||
| -41 | 4.3 | TATTAGAAAAACTTACA | ||
| Bacillus clausii KSM-K16 | ABC3928 | -84 | 5.2 | TGTTAGATATCCTGACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2141 | -159 | 4.2 | TGTGAAAAAACTTAACA |
| -34 | 4.5 | TGTTAGTAAACATCACA | ||
|
Position: -46
Score: 5.7 Sequence: TGTCAGATTATCTGACA
Locus tag: EAT1b_2462
|
||||
| EAT1b_2462 | -46 | 5.7 | TGTCAGATTATCTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tnrA | ||||
| Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU13310 | -124 | 3.9 | TGTTAATTTTTCTTCCG |
| -81 | 5.5 | TGTTAGAAAATATGACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_013130 | -124 | 4.1 | TGTCAATTTTTCTGCCG |
| -81 | 4.8 | CGTCAGAAAACCTGACA | ||
| Bacillus pumilus SAFR-032 | BPUM_1230 | -121 | 4 | TGTCAACTTTCCTTCCA |
| -80 | 5.5 | TGTTATATTTTCTAACA | ||
| Bacillus licheniformis DSM 13 | BLi01490 | -124 | 3.8 | TGTAAACTTTTCTTCCG |
| -81 | 5.6 | TGTTAGATTTTCTGACA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1544 | -113 | 4.9 | TGTTACTTTTTATAACA |
| -82 | 4.9 | TGTTACTTTTTATAACA | ||
| -27 | 5.4 | TGTTATAAAATATGACA | ||
| Geobacillus kaustophilus HTA426 | GK1860 | -86 | 3.9 | TGTTAATTTTATTTACA |
| -33 | 4.6 | CGTTAGAAAATATAACG | ||
| Bacillus halodurans C-125 | BH1494 | -110 | 5.5 | TGTAAGAAAATCTAACA |
| Bacillus clausii KSM-K16 | ABC1760 | -99 | 5.5 | TGTTAGATTTTCTTACA |
| -57 | 5 | TGTGATATATTGTTACA | ||
| Oceanobacillus iheyensis HTE831 | OB1650 | -80 | 5.1 | TGTTAGAAATACTAACA |
| -57 | 4.3 | TGACATATAAGCTGACG | ||
| Paenibacillus sp. JDR-2 | Pjdr2_5154 | -302 | 5.7 | TGTTAGATAATCTAACA |
| -41 | 5 | TGTTAGAAAACATTACA | ||