Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Exiguobacterium sp. AT1b

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sp. AT1b
Orthologous TF(s) EAT1b_2462
Regulated genes 8
Built upon 304 sites [see more]
Predicted regulatory interactions in Exiguobacterium sp. AT1b
Locus tag Position Score Sequence
Position: 1
Score: 4.1
Sequence: TGTTACAAAAAGTCACG
Locus tag: EAT1b_0595
EAT1b_0595 1 4.1 TGTTACAAAAAGTCACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: recO
Ortholog function: DNA recombination and repair protein RecO
Bacillus subtilis subsp. subtilis str. 168 BSU25280 -135 4.3 TGTGTCATTATCTCACA
Bacillus amyloliquefaciens FZB42 RBAM_023580 -310 4.9 TGTGAGATTACCTCACA
Bacillus pumilus SAFR-032 BPUM_2260 -134 5.5 TGTCATAAAATCTGACA
Bacillus licheniformis DSM 13 BLi02719 -166 4.1 TGGAATGTATTTTCACA
Geobacillus kaustophilus HTA426 GK2486 -100 4.2 GGTTAGAAAATTTTACG
Bacillus halodurans C-125 BH1369 -216 4.4 TGCAAGAAAATGTCACA
Position: -97
Score: 5.7
Sequence: TGTCAGATAATCTGACA
Locus tag: EAT1b_2461
EAT1b_2461 -97 5.7 TGTCAGATAATCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1 Aflv_1332 -112 4.6 TGTCATGAAAAATAACA
-49 4.8 TGTAATATATTATAACC
-27 5 TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426 GK1452 -124 4.4 TGTTAAGAAATTTAACA
-48 5.4 TGTTATATATTATGACA
Bacillus halodurans C-125 BH3834 -138 4 TGTCAGATATAGGCACA
-113 4.9 TGTCTGATTATCTGACA
-41 4.3 TATTAGAAAAACTTACA
Bacillus clausii KSM-K16 ABC3928 -84 5.2 TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2 Pjdr2_2141 -159 4.2 TGTGAAAAAACTTAACA
-34 4.5 TGTTAGTAAACATCACA
Position: -46
Score: 5.7
Sequence: TGTCAGATTATCTGACA
Locus tag: EAT1b_2462
EAT1b_2462 -46 5.7 TGTCAGATTATCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -124 3.9 TGTTAATTTTTCTTCCG
-81 5.5 TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42 RBAM_013130 -124 4.1 TGTCAATTTTTCTGCCG
-81 4.8 CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032 BPUM_1230 -121 4 TGTCAACTTTCCTTCCA
-80 5.5 TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13 BLi01490 -124 3.8 TGTAAACTTTTCTTCCG
-81 5.6 TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1 Aflv_1544 -113 4.9 TGTTACTTTTTATAACA
-82 4.9 TGTTACTTTTTATAACA
-27 5.4 TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426 GK1860 -86 3.9 TGTTAATTTTATTTACA
-33 4.6 CGTTAGAAAATATAACG
Bacillus halodurans C-125 BH1494 -110 5.5 TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16 ABC1760 -99 5.5 TGTTAGATTTTCTTACA
-57 5 TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831 OB1650 -80 5.1 TGTTAGAAATACTAACA
-57 4.3 TGACATATAAGCTGACG
Paenibacillus sp. JDR-2 Pjdr2_5154 -302 5.7 TGTTAGATAATCTAACA
-41 5 TGTTAGAAAACATTACA
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