Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Exiguobacterium sp. AT1b

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sp. AT1b
Orthologous TF(s) EAT1b_0699
Regulated genes 24
Built upon 559 sites [see more]
Predicted regulatory interactions in Exiguobacterium sp. AT1b
Locus tag Position Score Sequence
Position: -38
Score: 4.9
Sequence: ATGAAAACGCTTTATA
Locus tag: EAT1b_0159
EAT1b_0159 -38 4.9 ATGAAAACGCTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Transcriptional regulator of fructose utilization, DeoR family
Anoxybacillus flavithermus WK1 Aflv_1478 -24 4.6 ATGTAAGCGATTTAAA
Bacillus amyloliquefaciens FZB42 RBAM_014120 -28 4.5 ATGAATACGTTTCCAA
Bacillus cereus ATCC 14579 BC3720 -46 4.3 TTGTGACCGTTTTCAT
Bacillus licheniformis DSM 13 BLi01652 -29 4.6 ATGAAGGCGTTTCCAA
Bacillus pumilus SAFR-032 BPUM_1334 -30 4.7 ATGAATACGTTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU14380 -29 4.7 ATGAATACGTTTTCAT
Oceanobacillus iheyensis HTE831 OB0840 -113 5 TTGAAAGCGTTTTATT
Position: -134
Score: 5.4
Sequence: TTGAAAACGCTTACAA
Locus tag: EAT1b_0396
EAT1b_0396 -134 5.4 TTGAAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcB
Ortholog function: Hypothetical membrane spanning protein
Geobacillus kaustophilus HTA426 GK0929 -37 4.8 TTGAAAACGCTTGAAT
Position: -36
Score: 4.3
Sequence: ATGAAAGCGATTTAGT
Locus tag: EAT1b_0550
EAT1b_0550 -36 4.3 ATGAAAGCGATTTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcK
Ortholog function: Glucokinase (EC 2.7.1.2)
Anoxybacillus flavithermus WK1 Aflv_0895 -23 4.5 TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579 BC4260 -57 4.3 ATGTGAACGTTTTCTT
Bacillus halodurans C-125 BH1425 -206 4.4 ATGAAAACGGTTTATG
Bacillus pumilus SAFR-032 BPUM_2215 -49 4.2 CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU24850 -79 4.7 TTGTCAGCGTTTTCTT
Position: -124
Score: 4.5
Sequence: ATTATAGCGCTTTCAT
Position: 15
Score: 5
Sequence: TTGAAAGCGTTAACAG
Locus tag: EAT1b_0695
EAT1b_0695 -124 4.5 ATTATAGCGCTTTCAT
15 5 TTGAAAGCGTTAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1 Aflv_0462 237 4.9 ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_026800 -102 4.5 TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16 ABC2760 -65 4.7 TTGAAAACGTTACCTT
0 4.8 ATGAAAGCGCTTCCTG
Bacillus halodurans C-125 BH3234 6 4.4 TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13 BLi03119 6 4.7 TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032 BPUM_2616 -30 4.7 TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU29680 -101 4.5 TATAAAGCGTTTTCAA
6 4.8 TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831 OB0022 -36 4.5 TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2 Pjdr2_3796 -56 5 TTGAAAGCGTATTCTT
Position: -41
Score: 5
Sequence: ATGAAAGCGCTATAAT
Locus tag: EAT1b_0696
EAT1b_0696 -41 5 ATGAAAGCGCTATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Anoxybacillus flavithermus WK1 Aflv_0461 -70 4.7 ATGAAAACGATTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_026810 -72 4.9 TTGAAAACGCTTTATA
Bacillus licheniformis DSM 13 BLi03120 -69 4.9 ATGAAAACGCTTAATA
Bacillus pumilus SAFR-032 BPUM_2617 -74 4.4 GTGAAACCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168 BSU29690 -75 4.9 TTGAAAACGCTTTATA
Position: -31
Score: 4.7
Sequence: ATGAAAACTCTTACAA
Locus tag: EAT1b_0938
EAT1b_0938 -31 4.7 ATGAAAACTCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treA
Ortholog function: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Bacillus amyloliquefaciens FZB42 RBAM_007980 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0632 234 4.4 TTGATAACGCTTGCAG
Bacillus licheniformis DSM 13 BLi00797 318 4.6 GTGAAAACGCTTGCAG
Bacillus pumilus SAFR-032 BPUM_0729 318 4 GTGAAAACGCTTGCGG
Bacillus subtilis subsp. subtilis str. 168 BSU07810 318 4.6 GTGAAAACGCTTGCAG
Position: -48
Score: 4.5
Sequence: AAGTAACCGTTTTCAT
Locus tag: EAT1b_0939
EAT1b_0939 -48 4.5 AAGTAACCGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_007970 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0631 234 4.4 TTGATAACGCTTGCAG
Bacillus halodurans C-125 BH2216 136 4.4 TTGAAAGCCTTGACAT
318 4.4 GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13 BLi00796 318 4.6 GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168 BSU07800 318 4.6 GTGAAAACGCTTGCAG
Position: -211
Score: 4.5
Sequence: ATGAAAACGGCTACAA
Locus tag: EAT1b_1444
EAT1b_1444 -211 4.5 ATGAAAACGGCTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8)
Bacillus amyloliquefaciens FZB42 RBAM_034850 -99 5 TTGAAAGCGCTATAAT
Bacillus clausii KSM-K16 ABC3910 -143 4.3 TTGAAAACCCTTTCCT
-124 4.5 ATGGAAGCGTAATCTA
Bacillus halodurans C-125 BH3823 -194 4.8 TTGGAAACGCTTTAAA
Bacillus licheniformis DSM 13 BLi03997 -104 4.3 GTGTAAACGTTATAAT
Bacillus pumilus SAFR-032 BPUM_3415 -100 4.9 TTGTAAGCGCTATAAT
Bacillus subtilis subsp. subtilis str. 168 BSU37660 -100 5 ATGAAAGCGCTATAAT
-38 4 AAGAAAGCGTTTTTGT
Position: -56
Score: 4.3
Sequence: AAGAAAACGCTTTTTT
Locus tag: EAT1b_1598
EAT1b_1598 -56 4.3 AAGAAAACGCTTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -33
Score: 4.6
Sequence: ATGTAACCGATTTCAA
Locus tag: EAT1b_1883
EAT1b_1883 -33 4.6 ATGTAACCGATTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gmuB
Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_035870 -38 4.7 ATGAAAACGTTTTAAC
Bacillus clausii KSM-K16 ABC0481 -60 4.9 TTGTAAGCGGATTCAT
Bacillus halodurans C-125 BH3921 -36 4.2 GTGAAAGCGCTTATCA
Bacillus licheniformis DSM 13 BLi02564 -34 4.8 GTGAAAGCGCTTTTAA
Bacillus pumilus SAFR-032 BPUM_2121 -37 4.2 CTGGAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU05810 -33 5 ATGTAAGCGTTTTAAT
Geobacillus kaustophilus HTA426 GK1859 -50 4.8 TTGAAAACGATATCAT
Oceanobacillus iheyensis HTE831 OB2760 -62 4.8 TTGTAACCGTTTTCTT
Position: -37
Score: 4.8
Sequence: TTGAAATCGCTATCAT
Locus tag: EAT1b_1961
EAT1b_1961 -37 4.8 TTGAAATCGCTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lutA
Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Anoxybacillus flavithermus WK1 Aflv_2009 -30 4.7 AAGAAAACGTTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_031470 -181 4.7 ATGTAAGCGATTACTT
Bacillus cereus ATCC 14579 BC1303 -122 4.7 AAGTAAGCGTTTTCTT
Bacillus clausii KSM-K16 ABC0975 -69 4.8 TTGTAAGTGCTTACAT
Bacillus halodurans C-125 BH1832 -70 4.8 TTTAAAACGCTTACAT
Geobacillus kaustophilus HTA426 GK0395 -343 4.8 ATAAAAGCGTTTTCAG
Oceanobacillus iheyensis HTE831 OB0370 -36 4.1 ATGAAATCGCTTCATT
Position: -316
Score: 4.4
Sequence: AAGTAAGCGGTTCCAA
Locus tag: EAT1b_2201
EAT1b_2201 -316 4.4 AAGTAAGCGGTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlR
Ortholog function: Mannitol operon activator, BglG family
Anoxybacillus flavithermus WK1 Aflv_1564 -65 4.4 TTGAAAGCGGATGAAT
Bacillus amyloliquefaciens FZB42 RBAM_004390 -96 5 TTGAAAGCGTTTTATA
Bacillus halodurans C-125 BH3853 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00508 -96 4.2 TTGACAGCGTTTTATG
Bacillus pumilus SAFR-032 BPUM_0388 -60 5 TTGAAAGCGTTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU04160 -99 5 TTGAAAGCGTTTTATA
Oceanobacillus iheyensis HTE831 OB2602 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6225 -33 4.1 AAGAAAGCGATTTTAT
Position: -104
Score: 4
Sequence: GAGAAAGCGCTTACTC
Locus tag: EAT1b_2202
EAT1b_2202 -104 4 GAGAAAGCGCTTACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS family mannitol-permease II, BC component
Anoxybacillus flavithermus WK1 Aflv_1566 -58 4.5 CTGTAAGCGCTTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_004230 -96 4.6 TTGTAAGCGTTTTATG
Bacillus halodurans C-125 BH3854 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00505 -94 4.4 CTGTAAGCGTTTTAAT
Bacillus pumilus SAFR-032 BPUM_0369 -106 4.1 GTGAAAGCGTTTTACG
Bacillus subtilis subsp. subtilis str. 168 BSU03981 -95 4 CTGTAAGCGTTTTAAC
Geobacillus kaustophilus HTA426 GK1948 -54 4.8 TTGTAAGCGTTTTAAG
Oceanobacillus iheyensis HTE831 OB2603 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6226 -33 4.1 AAGAAAGCGATTTTAT
Position: -271
Score: 4.4
Sequence: AATAAAGCGTTTACAT
Position: -110
Score: 4.4
Sequence: ATGCAAACGTTTTCAC
Locus tag: EAT1b_2502
EAT1b_2502 -271 4.4 AATAAAGCGTTTACAT
-110 4.4 ATGCAAACGTTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16 ABC3520 -37 4.6 AAGAAAGCGGTTACTT
Bacillus halodurans C-125 BH2019 -55 4.4 TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032 BPUM_3613 -51 4.8 AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34160 -39 5 TTTAAAGCGCTTTCAT
Position: -53
Score: 4.6
Sequence: ATGAAAGCGTTCACAG
Locus tag: EAT1b_2538
EAT1b_2538 -53 4.6 ATGAAAGCGTTCACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: odhA
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Bacillus amyloliquefaciens FZB42 RBAM_019130 -101 4.7 TTGGAAGCGTTTTTAT
Bacillus cereus ATCC 14579 BC1252 -101 4.3 AAGAAAACATTTACAT
Bacillus clausii KSM-K16 ABC2114 -63 4.8 TTGTAAGCGCTTGAAA
Bacillus halodurans C-125 BH2206 -64 5 ATGAAAGCGTTATAAA
Bacillus licheniformis DSM 13 BLi02260 -100 4.3 GTGGAAGCGTTTTTAT
Bacillus pumilus SAFR-032 BPUM_1862 -101 4.7 TTGGAAGCGTTTTATT
Bacillus subtilis subsp. subtilis str. 168 BSU19370 -101 4.7 TTGGAAGCGTTTTTAT
Geobacillus kaustophilus HTA426 GK1023 -123 4.1 GTGAAAACGTTTATAC
Oceanobacillus iheyensis HTE831 OB1089 -51 4.3 TTTGAACCGTTTTCAT
Paenibacillus sp. JDR-2 Pjdr2_4724 -242 4.4 ATGAATACGCTTTAAA
Position: -69
Score: 5.3
Sequence: ATGAAAGCGTTTTCTT
Locus tag: EAT1b_2611
EAT1b_2611 -69 5.3 ATGAAAGCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lcfA
Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Anoxybacillus flavithermus WK1 Aflv_0564 405 4.8 GTGAAAACGCATACAA
Bacillus amyloliquefaciens FZB42 RBAM_025620 411 4.8 ATGAAAACGTTATCAC
Bacillus licheniformis DSM 13 BLi03003 411 5.4 ATGAAAGCGCTAACAA
Bacillus pumilus SAFR-032 BPUM_2513 411 5.2 ATGAAAGCGCTGACAA
Bacillus subtilis subsp. subtilis str. 168 BSU28560 411 5.3 ATGAAAACGTTATCAA
Position: -56
Score: 5
Sequence: TTGAAAACGCTTTTAT
Locus tag: EAT1b_2627
EAT1b_2627 -56 5 TTGAAAACGCTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42 RBAM_025520 -143 4.3 ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579 BC4518 -178 4.3 ATGTATACGTTTTCTT
Bacillus clausii KSM-K16 ABC2664 -190 4.3 TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13 BLi02994 -143 4.4 ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2503 -139 4.2 ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU28450 -139 4.4 ATGTACGCGTTTTCTT
Position: -69
Score: 4.3
Sequence: TAGACAGCGCTTTCAG
Locus tag: EAT1b_2902
EAT1b_2902 -69 4.3 TAGACAGCGCTTTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sucC
Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Bacillus amyloliquefaciens FZB42 RBAM_015920 -52 4.8 ATGAAAGCGCAGTCTA
Bacillus licheniformis DSM 13 BLi01829 -53 4.8 ATGAAAGCGCAGTCTA
Bacillus pumilus SAFR-032 BPUM_1507 -57 4.8 ATGAAAGCGCAGTCTA
Bacillus subtilis subsp. subtilis str. 168 BSU16090 -51 4.8 ATGAAAGCGCAGTCTA
Geobacillus kaustophilus HTA426 GK1208 -47 4.2 ATGAAAGCGCTAAGAC
Position: -85
Score: 4.4
Sequence: ATGTAACCCCTTTCAA
Locus tag: EAT1b_2996
EAT1b_2996 -85 4.4 ATGTAACCCCTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndk
Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6)
Anoxybacillus flavithermus WK1 Aflv_1096 -104 4.3 ATTAAATCGTTTTCAT
Bacillus amyloliquefaciens FZB42 RBAM_020890 -37 4.5 TTGAAAGCCTATACAT
Bacillus clausii KSM-K16 ABC1890 -70 4.4 TTGTTAGCGTTTTCCT
Bacillus licheniformis DSM 13 BLi02408 -39 4.5 TTGAAAGCCTATACAT
Bacillus pumilus SAFR-032 BPUM_2004 -43 4.3 ATGTAAGCCTATACAT
Bacillus subtilis subsp. subtilis str. 168 BSU22730 -38 4.1 GTGAAAGCCTATACAT
Geobacillus kaustophilus HTA426 GK2209 -105 4.4 TTATTAGCGCTTTCAA