Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GamR regulog to Exiguobacterium sp. AT1b

Reference regulog properties
Source regulog: GamR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucosamine utilization
Effector: Glucosamine-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sp. AT1b
Orthologous TF(s) EAT1b_1139
Regulated genes 2
Built upon 25 sites [see more]
Predicted regulatory interactions in Exiguobacterium sp. AT1b
Locus tag Position Score Sequence
Position: -50
Score: 5.6
Sequence: ATATTTGTTACGACAAAAAG
Locus tag: EAT1b_1140
EAT1b_1140 -50 5.6 ATATTTGTTACGACAAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: licH
Ortholog function: Cytoplasmic 6-phospho-beta-glucosidase (EC 3.2.1.86)
Bacillus clausii KSM-K16 ABC0643 -97 5.2 AAATAGGTAGTTACAAATTT
-73 5.7 TGATTAGTAATTACAAATAT
Bacillus halodurans C-125 BH0912 -74 5.6 TGATTAGTAGTAACAAATAT
Bacillus licheniformis DSM 13 BLi00335 -99 6.2 CAATTTGTTATAACAAATAT
-85 4.6 AAATATGTATGGACAAATTT
-71 5.2 AAATTTGTTATAACATGTTA
Oceanobacillus iheyensis HTE831 OB2273 -126 5.8 AATTGTGTTATAACAAATTT
© 2009-2020 RegPrecise