Regulons of Herpetosiphon aurantiacus ATCC 23779

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	Caur_1157	Beta-glucoside	Beta-glucosides utilization	3	5
TF	Caur_3448		Sugar utilization	1	1
TF	Caur_3587			3	3
TF	HpdR		Tyrosine degradation	1	1
TF	HrcA	Heat shock	Heat shock response	2	4
TF	LexA	DNA damage	SOS response	13	10
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	1
TF	NagR	N-acetylglucosamine	N-acetylglucosamine utilization	1	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	4	7
TF	Rex	NADH	Energy metabolism	8	4
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	10	9
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	5	3
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	4	1
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	PyrR	PyrR	Pyrimidine metabolism	2	1
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	5	4
RNA	T-box(Gly)	Gly-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	1	1
RNA	T-box(Pro)	Pro-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ser)	Ser-tRNA	Amino acid metabolism	2	1
RNA	T-box(Thr)	Thr-tRNA	Amino acid metabolism	1	1
RNA	T-box(Trp)	Trp-tRNA	Amino acid metabolism	1	1
RNA	T-box(Val)	Val-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	1
RNA	glmS	Glucosamine-6-phosphate	Amino sugar metabolism	1	1
RNA	yybP-ykoY			2	2

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --