Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Aggregatibacter aphrophilus NJ8700

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArgR Arginine Arginine biosynthesis 3 2
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 3 3
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 2 2
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Fructose utilization 2 1
TF Fur Iron ion, (Fe2+) Iron homeostasis 15 22
TF GalR Galactose Galactose utilization 3 4
TF GntR Gluconate Gluconate utilization 2 4
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 3 3
TF LexA DNA damage SOS response 11 11
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 7 5
TF MetR Homocysteine Methionine biosynthesis 5 4
TF ModE Molybdate Molybdenum homeostasis 5 4
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 8 6
TF NarP Nitrite; Nitrate Nitrate and nitrite respiration 17 16
TF NimR Nickel ion, (Ni2+) Nickel homeostasis 2 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 5 4
TF PurR Hypoxanthine; Guanine Purine metabolism 11 9
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 5 4
TF TrpR Tryptophan Tryptophan biosynthesis 4 4
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 4 2
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 4 1
RNA Glycine Glycine Glycine metabolism 1 2
RNA His_leader Histidine biosynthesis 4 2
RNA L10_leader Ribosome biogenesis 1 1
RNA Leu_leader Branched-chain amino acid biosynthesis 2 2
RNA Lysine Lysine Lysine biosynthesis 2 1
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis; Molybdenum homeostasis 2 1
RNA PreQ1 Pre-queuosine1 Queuosine biosynthesis 2 2
RNA S15 Ribosome biogenesis 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
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