Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Aggregatibacter aphrophilus NJ8700

Properties
Regulator type: Transcription factor
TF locus tag: NT05HA_1602
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Pasteurellales
Statistics of regulated genes:
- Genes 47
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -153
Score: 5
Sequence: TAACTTTTTTGAGGTA
Locus tag: NT05HA_1299
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: NT05HA_1300
Name: frdB
Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: NT05HA_1301
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: NT05HA_1302
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
NT05HA_1299
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
NT05HA_1300
frdB
Fumarate reductase subunit B (EC 1.3.5.4)
NT05HA_1301
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
NT05HA_1302
frdD
Fumarate reductase subunit D (EC 1.3.5.4)
Position: -117
Score: 3.7
Sequence: TACCTATAATGTTGTA
Locus tag: NT05HA_1388
Name: arcA
Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family
NT05HA_1388
arcA
Anaerobic metabolism transcriptional regulator arcA, OmpR family
Position: -31
Score: 4.6
Sequence: TACCCATTTTTAATTA
Locus tag: NT05HA_1109
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
NT05HA_1109
mdh
Malate dehydrogenase (EC 1.1.1.37)
Position: -68
Score: 4.4
Sequence: TAACCAATTATGGTTA
Locus tag: NT05HA_0856
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: NT05HA_0857
Name: torZ
Funciton: Biotin sulfoxide reductase
NT05HA_0856
torY
Biotin sulfoxide reductase, cytochrome c-type
NT05HA_0857
torZ
Biotin sulfoxide reductase
Position: -49
Score: 3.7
Sequence: TAATTCTAACCAGTTA
Locus tag: NT05HA_1312
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
NT05HA_1312
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -101
Score: 4.1
Sequence: TACTGCTAAAGAGTTA
Locus tag: NT05HA_0026
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: NT05HA_0027
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: NT05HA_0028
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: NT05HA_0029
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: NT05HA_0030
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: NT05HA_0031
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: NT05HA_0032
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: NT05HA_0033
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: NT05HA_0034
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
NT05HA_0026
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
NT05HA_0027
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
NT05HA_0028
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
NT05HA_0029
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
NT05HA_0030
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
NT05HA_0031
ccmF
Cytochrome c heme lyase, subunit CcmF
NT05HA_0032
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
NT05HA_0033
ccmH
Cytochrome c heme lyase, subunit CcmH
NT05HA_0034
ccmH
Cytochrome c heme lyase, subunit CcmH
Position: -155
Score: 4.2
Sequence: TACCCTGTTATAGTGA
Locus tag: NT05HA_2016
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: NT05HA_2015
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: NT05HA_2014
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: NT05HA_2013
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: NT05HA_2012
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: NT05HA_2011
Name: napC
Funciton: Cytochrome c-type protein NapC
NT05HA_2016
napD
Periplasmic nitrate reductase component NapD
NT05HA_2015
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
NT05HA_2014
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
NT05HA_2013
napH
Periplasmic nitrate reductase, polyferredoxin NapH
NT05HA_2012
napB
Nitrate reductase cytochrome c550-type subunit
NT05HA_2011
napC
Cytochrome c-type protein NapC
Position: -250
Score: 4.1
Sequence: TACCTAAAAATTGTTA
Position: -190
Score: 4.3
Sequence: TACTTATAAATGGGTA
Locus tag: NT05HA_0037
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: NT05HA_0038
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: NT05HA_0039
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: NT05HA_0040
Name: nrfD
Funciton: Nitrite reductase, NrfD component
NT05HA_0037
nrfA
Nitrite reductase, cytochrome c(552)
NT05HA_0038
nrfB
Cytochrome c-type protein NrfB precursor
NT05HA_0039
nrfC
Nitrite reductase, Fe-S center subunit
NT05HA_0040
nrfD
Nitrite reductase, NrfD component
Position: -202
Score: 4.1
Sequence: TACTCCTATCTAATTA
Locus tag: NT05HA_0112
Name: focA
Funciton: Formate transporter, FNT family
Locus tag: NT05HA_0113
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
NT05HA_0112
focA
Formate transporter, FNT family
NT05HA_0113
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
Position: -258
Score: 4.6
Sequence: TACTTATTTGGGGTTA
Locus tag: NT05HA_1350
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: NT05HA_1349
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
NT05HA_1350
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
NT05HA_1349
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Position: -371
Score: 4.6
Sequence: TACCTCTTTGTGATTA
Locus tag: NT05HA_1617
Name: nqrA
Funciton: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
Locus tag: NT05HA_1616
Name: nqrB
Funciton: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
Locus tag: NT05HA_1615
Name: nqrC
Funciton: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
Locus tag: NT05HA_1614
Name: nqrD
Funciton: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
Locus tag: NT05HA_1613
Name: nqrE
Funciton: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
Locus tag: NT05HA_1612
Name: nqrF
Funciton: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
NT05HA_1617
nqrA
Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-)
NT05HA_1616
nqrB
Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-)
NT05HA_1615
nqrC
Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-)
NT05HA_1614
nqrD
Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-)
NT05HA_1613
nqrE
Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-)
NT05HA_1612
nqrF
Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-)
Position: -190
Score: 4.6
Sequence: TACCTATTTCTAATTA
Locus tag: NT05HA_0812
Name: hybO
Funciton: Hydrogenase II, small subunit (EC 1.12.99.6)
Locus tag: NT05HA_0813
Name: hybA
Funciton: Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
Locus tag: NT05HA_0814
Name: hybB
Funciton: Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
Locus tag: NT05HA_0815
Name: hybC
Funciton: Hydrogenase II, large subunit (EC 1.12.99.6)
Locus tag: NT05HA_0816
Name: hybD
Funciton: Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
Locus tag: NT05HA_0817
Name: hybE
Funciton: Hydrogenase II, maturation chaperone (EC 1.12.99.6)
Locus tag: NT05HA_0818
Name: hybG
Funciton: Hydrogenase II, accessory protein (EC 1.12.99.6)
NT05HA_0812
hybO
Hydrogenase II, small subunit (EC 1.12.99.6)
NT05HA_0813
hybA
Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
NT05HA_0814
hybB
Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
NT05HA_0815
hybC
Hydrogenase II, large subunit (EC 1.12.99.6)
NT05HA_0816
hybD
Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
NT05HA_0817
hybE
Hydrogenase II, maturation chaperone (EC 1.12.99.6)
NT05HA_0818
hybG
Hydrogenase II, accessory protein (EC 1.12.99.6)
Position: -35
Score: 4.1
Sequence: TAACCCGTTTTGATTA
Locus tag: NT05HA_1781
Name: eno
Funciton: Enolase (EC 4.2.1.11)
NT05HA_1781
eno
Enolase (EC 4.2.1.11)
Position: -70
Score: 4.1
Sequence: TAACAGTTTTTAGGTA
Position: -20
Score: 4
Sequence: TAACACTAAAGAGGTG
Locus tag: NT05HA_1606
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
NT05HA_1606
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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