Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Aggregatibacter aphrophilus NJ8700

Properties
Regulator type: Transcription factor
TF locus tag: NT05HA_1581
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Pasteurellales
Statistics of regulated genes:
- Genes 11
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 96 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -63
Score: 5.7
Sequence: TACTGTATATAACAACAGTA
Position: -37
Score: 5.6
Sequence: CACTGTACAAAAACACAGTT
Locus tag: NT05HA_0999
Name: impA
Funciton: SOS-response transcriptional repressors (RecA-mediated autopeptidases)
impA
SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Position: -66
Score: 5.6
Sequence: AACTGGATATTTATCCAGTT
Locus tag: NT05HA_1353
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: NT05HA_1352
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -55
Score: 6.1
Sequence: TACTGTATATTAAAACAGTA
Locus tag: NT05HA_1273
Name: recN
Funciton: DNA repair protein RecN
recN
DNA repair protein RecN

Position: -110
Score: 5.4
Sequence: AACTGTGCAAATATCCAGTT
Locus tag: NT05HA_2209
Name: ssb
Funciton: Single-stranded DNA-binding protein
ssb
Single-stranded DNA-binding protein

Position: -86
Score: 4.8
Sequence: CACTGTTTTTTTATACAGAC
Locus tag: NT05HA_0196
Name: mfd
Funciton: Transcription-repair coupling factor (superfamily II helicase)
mfd
Transcription-repair coupling factor (superfamily II helicase)

Position: -67
Score: 6.1
Sequence: TACTGTATATTAATACAGTT
Locus tag: NT05HA_1941
Name: recA
Funciton: Recombinase A
Locus tag: NT05HA_1940
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -79
Score: 5.4
Sequence: AACTGGATATTTGCACAGTT
Locus tag: NT05HA_2208
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -50
Score: 5.2
Sequence: TTCTGTATATAATACCAGTC
Position: -28
Score: 4.9
Sequence: TCATGTATATATTAACAGGA
Locus tag: NT05HA_1581
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -36
Score: 5.3
Sequence: GCCTGTACAAAAAAACAGTA
Locus tag: NT05HA_1086
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD