Regulon of LexA in Aggregatibacter aphrophilus NJ8700
| Regulator type: | Transcription factor |
| TF locus tag: | NT05HA_1581 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Pasteurellales
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -63
Score: 5.7 Sequence: TACTGTATATAACAACAGTA
Position: -37
Score: 5.6 Sequence: CACTGTACAAAAACACAGTT
Locus tag: NT05HA_0999
Name: impA Funciton: SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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impA
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SOS-response transcriptional repressors (RecA-mediated autopeptidases)
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Position: -66
Score: 5.6 Sequence: AACTGGATATTTATCCAGTT
Locus tag: NT05HA_1353
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: NT05HA_1352
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -55
Score: 6.1 Sequence: TACTGTATATTAAAACAGTA
Locus tag: NT05HA_1273
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -110
Score: 5.4 Sequence: AACTGTGCAAATATCCAGTT
Locus tag: NT05HA_2209
Name: ssb Funciton: Single-stranded DNA-binding protein |
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ssb
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Single-stranded DNA-binding protein
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Position: -86
Score: 4.8 Sequence: CACTGTTTTTTTATACAGAC
Locus tag: NT05HA_0196
Name: mfd Funciton: Transcription-repair coupling factor (superfamily II helicase) |
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mfd
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Transcription-repair coupling factor (superfamily II helicase)
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Position: -67
Score: 6.1 Sequence: TACTGTATATTAATACAGTT
Locus tag: NT05HA_1941
Name: recA Funciton: Recombinase A
Locus tag: NT05HA_1940
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -79
Score: 5.4 Sequence: AACTGGATATTTGCACAGTT
Locus tag: NT05HA_2208
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -50
Score: 5.2 Sequence: TTCTGTATATAATACCAGTC
Position: -28
Score: 4.9 Sequence: TCATGTATATATTAACAGGA
Locus tag: NT05HA_1581
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -36
Score: 5.3 Sequence: GCCTGTACAAAAAAACAGTA
Locus tag: NT05HA_1086
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |