Regulon of NagC in Aggregatibacter aphrophilus NJ8700
| Regulator type: | Transcription factor |
| TF locus tag: | NT05HA_0409 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Regulog: | NagC - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagC
- By taxonomy - Pasteurellales
- By TF family - ROK
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -214
Score: 6.5 Sequence: TTATTTTTTATCATAAAATAA
Locus tag: NT05HA_2308
Name: omp Funciton: Outer membrane receptor protein |
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omp
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Outer membrane receptor protein
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Position: -103
Score: 6.4 Sequence: TTATTTTTCAAAATAAAAAAA
Locus tag: NT05HA_1414
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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znuA
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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Position: -36
Score: 5.6 Sequence: TTATTTTATGGAATCAAAAAA
Locus tag: NT05HA_0540
Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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nagE
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PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
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Position: -96
Score: 5.8 Sequence: TTATTTTTCTATTGAAAATAA
Position: -33
Score: 6.6 Sequence: TTATTTTTCACTAAAAAATAA
Locus tag: NT05HA_1390
Name: rpmE1 Funciton: 50S ribosomal protein L31
Locus tag: NT05HA_1389
Name: rpmJ1 Funciton: ribosomal protein L36 |
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rpmE1
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50S ribosomal protein L31
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rpmJ1
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ribosomal protein L36
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Position: -84
Score: 5.6 Sequence: TTATTTTAGTGTTTTAAATAA
Locus tag: NT05HA_0617
Name: ptsH Funciton: Phosphocarrier protein of PTS system
Locus tag: NT05HA_0618
Name: ptsI Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Locus tag: NT05HA_0619
Name: crr Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
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ptsH
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Phosphocarrier protein of PTS system
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ptsI
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Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
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crr
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PTS system, glucose-specific IIA component (EC 2.7.1.69)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |