Regulons of Cyanothece sp. PCC 7425

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArsR	Arsenite	Arsenic resistance	2	1
TF	CcmR		Carbon dioxide fixation	10	4
TF	Crp	Cyclic 3',5'-AMP		25	10
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	32	16
TF	HrcA	Heat shock	Heat shock response	3	2
TF	LexA	DNA damage	SOS response	5	4
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	2
TF	NrtR2	Adenosine diphosphate ribose	NAD biosynthesis	2	2
TF	NtcA	2-oxoglutarate	Nitrogen assimilation	33	16
TF	NtcB	Nitrite	Nitrogen assimilation	5	3
TF	PedR	Trx, thioredoxin protein	Photosynthesis; Carbon fixation	7	5
TF	PerR	Manganese ion, (Mn2+)	Peroxide stress response	3	5
TF	SmtB	Zinc ion, (Zn2+)	Zinc resistance	1	1
TF	SphR	Inorganic phosphate	Phosphate metabolism	21	5
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	3	4
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	8	5
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	4	2
RNA	GEMM_RNA_motif	Cyclic diguanylate	Second messenger response	9	5
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1
RNA	glnA	L-glutamine	Nitrogen assimilation	3	3
RNA	ydaO-yuaA		Cell wall metabolism; Osmotic stress response	3	2
RNA	ykkC-yxkD		Multidrug resistance	2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --