Regulons of Cyanothece sp. PCC 7425
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArsR |
Arsenite |
Arsenic resistance |
2 |
1 |
| TF |
CcmR |
|
Carbon dioxide fixation |
10 |
4 |
| TF |
Crp |
Cyclic 3',5'-AMP |
|
25 |
10 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
32 |
16 |
| TF |
HrcA |
Heat shock |
Heat shock response |
3 |
2 |
| TF |
LexA |
DNA damage |
SOS response |
5 |
4 |
| TF |
NrtR |
Adenosine diphosphate ribose |
NAD biosynthesis |
2 |
2 |
| TF |
NrtR2 |
Adenosine diphosphate ribose |
NAD biosynthesis |
2 |
2 |
| TF |
NtcA |
2-oxoglutarate |
Nitrogen assimilation |
33 |
16 |
| TF |
NtcB |
Nitrite |
Nitrogen assimilation |
5 |
3 |
| TF |
PedR |
Trx, thioredoxin protein |
Photosynthesis; Carbon fixation |
7 |
5 |
| TF |
PerR |
Manganese ion, (Mn2+) |
Peroxide stress response |
3 |
5 |
| TF |
SmtB |
Zinc ion, (Zn2+) |
Zinc resistance |
1 |
1 |
| TF |
SphR |
Inorganic phosphate |
Phosphate metabolism |
21 |
5 |
| TF |
SufR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
3 |
4 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
8 |
5 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
4 |
2 |
| RNA |
GEMM_RNA_motif |
Cyclic diguanylate |
Second messenger response |
9 |
5 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
1 |
1 |
| RNA |
glnA |
L-glutamine |
Nitrogen assimilation |
3 |
3 |
| RNA |
ydaO-yuaA |
|
Cell wall metabolism; Osmotic stress response |
3 |
2 |
| RNA |
ykkC-yxkD |
|
Multidrug resistance |
2 |
2 |
Export
|
Regulated Genes
|
[ Tab delimited format ]
|
DOWNLOAD
|
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
