Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Cyanothece sp. PCC 7425

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArsR Arsenite Arsenic resistance 2 1
TF CcmR Carbon dioxide fixation 10 4
TF Crp Cyclic 3',5'-AMP 25 10
TF Fur Iron ion, (Fe2+) Iron homeostasis 32 16
TF HrcA Heat shock Heat shock response 3 2
TF LexA DNA damage SOS response 5 4
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 2 2
TF NrtR2 Adenosine diphosphate ribose NAD biosynthesis 2 2
TF NtcA 2-oxoglutarate Nitrogen assimilation 33 16
TF NtcB Nitrite Nitrogen assimilation 5 3
TF PedR Trx, thioredoxin protein Photosynthesis; Carbon fixation 7 5
TF PerR Manganese ion, (Mn2+) Peroxide stress response 3 5
TF SmtB Zinc ion, (Zn2+) Zinc resistance 1 1
TF SphR Inorganic phosphate Phosphate metabolism 21 5
TF SufR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 3 4
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 8 5
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 4 2
RNA GEMM_RNA_motif Cyclic diguanylate Second messenger response 9 5
RNA L10_leader Ribosome biogenesis 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
RNA glnA L-glutamine Nitrogen assimilation 3 3
RNA ydaO-yuaA Cell wall metabolism; Osmotic stress response 3 2
RNA ykkC-yxkD Multidrug resistance 2 2
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