Regulon of NtcB in Cyanothece sp. PCC 7425
| Regulator type: | Transcription factor |
| TF locus tag: | Cyan7425_1599 |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Nitrite |
| Regulog: | NtcB - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LysR
- By effector - Nitrite
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -174
Score: 4.5 Sequence: ATGCAGGTTTGGCAT
Locus tag: Cyan7425_4573
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: Cyan7425_4572
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: Cyan7425_4571
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: Cyan7425_4570
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: Cyan7425_4569
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein |
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nirA
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ferredoxin--nitrite reductase
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nrtA
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nitrate/nitrite ABC transport system, substrate-binding protein
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nrtB
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nitrate/nitrite ABC transport system, permease protein
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nrtC
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nitrate/nitrite ABC transport system, ATP-binding protein
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nrtD
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nitrate/nitrite ABC transport system, ATP-binding protein
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Position: -238
Score: 4.6 Sequence: ATGCAGTTTATTCAT
Locus tag: Cyan7425_2230
Name: psbJ Funciton: photosystem II protein J |
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psbJ
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photosystem II protein J
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Position: -220
Score: 3.9 Sequence: ATGCGGCACCTGTAT
Locus tag: Cyan7425_0859
Name: psbM Funciton: photosystem II reaction centre M protein |
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psbM
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photosystem II reaction centre M protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |