Regulon of NtcB in Cyanothece sp. PCC 7425

Properties
Regulator type:	Transcription factor
TF locus tag:	Cyan7425_1599
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Nitrite
Regulog:	NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By effector - Nitrite
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -174 Score: 4.5 Sequence: ATGCAGGTTTGGCAT Locus tag: Cyan7425_4573 Name: nirA Funciton: ferredoxin--nitrite reductase Locus tag: Cyan7425_4572 Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein Locus tag: Cyan7425_4571 Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein Locus tag: Cyan7425_4570 Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: Cyan7425_4569 Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
	Cyan7425_4573	nirA	ferredoxin--nitrite reductase
	Cyan7425_4572	nrtA	nitrate/nitrite ABC transport system, substrate-binding protein
	Cyan7425_4571	nrtB	nitrate/nitrite ABC transport system, permease protein
	Cyan7425_4570	nrtC	nitrate/nitrite ABC transport system, ATP-binding protein
	Cyan7425_4569	nrtD	nitrate/nitrite ABC transport system, ATP-binding protein
Position: -238 Score: 4.6 Sequence: ATGCAGTTTATTCAT Locus tag: Cyan7425_2230 Name: psbJ Funciton: photosystem II protein J
	Cyan7425_2230	psbJ	photosystem II protein J
Position: -220 Score: 3.9 Sequence: ATGCGGCACCTGTAT Locus tag: Cyan7425_0859 Name: psbM Funciton: photosystem II reaction centre M protein
	Cyan7425_0859	psbM	photosystem II reaction centre M protein

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