Regulons of Haemophilus influenzae Rd KW20
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
3 |
5 |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
2 |
2 |
| TF |
FabR |
Unsaturated acyl-ACP; Unsaturated acyl-CoA |
Fatty acid biosynthesis |
3 |
2 |
| TF |
FadR |
Palmitoyl-CoA; Oleoyl-CoA |
Fatty acid degradation |
2 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
14 |
24 |
| TF |
GalR |
Galactose |
Galactose utilization |
3 |
3 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
3 |
2 |
| TF |
LexA |
DNA damage |
SOS response |
11 |
11 |
| TF |
MetJ |
S-adenosylmethionine |
Methionine metabolism; Methionine biosynthesis |
8 |
6 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
5 |
6 |
| TF |
ModE |
Molybdate |
Molybdenum homeostasis |
6 |
5 |
| TF |
NarP |
Nitrite; Nitrate |
Nitrate and nitrite respiration |
15 |
11 |
| TF |
NimR |
Nickel ion, (Ni2+) |
Nickel homeostasis |
3 |
2 |
| TF |
NmlR |
Diamide |
Carbonyl stress response |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
3 |
5 |
| TF |
PurR |
Hypoxanthine; Guanine |
Purine metabolism |
9 |
8 |
| TF |
RbsR |
Ribose |
Ribose utilization |
1 |
1 |
| TF |
SiaR |
Glucosamine-6-phosphate |
Sialic acid utilization |
3 |
2 |
| TF |
TrpR |
Tryptophan |
Tryptophan biosynthesis |
5 |
5 |
| TF |
TyrR |
Tyrosine; Phenylalanine |
Aromatic amino acid metabolism |
3 |
3 |
| TF |
UxuR |
Glucuronate |
Glucuronate utilization |
2 |
4 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
4 |
1 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
1 |
2 |
| RNA |
His_leader |
|
Histidine biosynthesis |
2 |
2 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
Leu_leader |
|
Branched-chain amino acid biosynthesis |
1 |
1 |
| RNA |
Lysine |
Lysine |
Lysine biosynthesis |
2 |
1 |
| RNA |
MOCO_RNA_motif |
Molybdenum |
Molybdopterin biosynthesis; Molybdenum homeostasis |
2 |
1 |
| RNA |
PreQ1 |
Pre-queuosine1 |
Queuosine biosynthesis |
1 |
1 |
| RNA |
S15 |
|
Ribosome biogenesis |
2 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
3 |
| RNA |
Thr_leader |
|
Threonine biosynthesis |
1 |
1 |
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