Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Haemophilus influenzae Rd KW20

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArgR Arginine Arginine biosynthesis 3 5
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 3 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 2 1
TF Fur Iron ion, (Fe2+) Iron homeostasis 14 24
TF GalR Galactose Galactose utilization 3 3
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 3 2
TF LexA DNA damage SOS response 11 11
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 8 6
TF MetR Homocysteine Methionine biosynthesis 5 6
TF ModE Molybdate Molybdenum homeostasis 6 5
TF NarP Nitrite; Nitrate Nitrate and nitrite respiration 15 11
TF NimR Nickel ion, (Ni2+) Nickel homeostasis 3 2
TF NmlR Diamide Carbonyl stress response 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 5
TF PurR Hypoxanthine; Guanine Purine metabolism 9 8
TF RbsR Ribose Ribose utilization 1 1
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 3 2
TF TrpR Tryptophan Tryptophan biosynthesis 5 5
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 3 3
TF UxuR Glucuronate Glucuronate utilization 2 4
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 4 1
RNA Glycine Glycine Glycine metabolism 1 2
RNA His_leader Histidine biosynthesis 2 2
RNA L10_leader Ribosome biogenesis 1 1
RNA Leu_leader Branched-chain amino acid biosynthesis 1 1
RNA Lysine Lysine Lysine biosynthesis 2 1
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis; Molybdenum homeostasis 2 1
RNA PreQ1 Pre-queuosine1 Queuosine biosynthesis 1 1
RNA S15 Ribosome biogenesis 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 4 3
RNA Thr_leader Threonine biosynthesis 1 1
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD