Regulon of SiaR in Haemophilus influenzae Rd KW20
| Regulator type: | Transcription factor |
| TF locus tag: | HI0143 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Sialic acid utilization |
| Effector: | Glucosamine-6-phosphate |
| Regulog: | SiaR - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pasteurellales
- By trascription factor - SiaR
- By TF family - RpiR
- By effector - Glucosamine-6-phosphate
- By pathway - Sialic acid utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -163
Score: 4.8 Sequence: TATGAAAAAACACTTCAAA
Locus tag: HI0145
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: HI0144
Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: HI0143
Name: siaR Funciton: Sialic acid utilization regulator, RpiR family
Locus tag: HI0142
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: HI0141
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: HI0140
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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nanE
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N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
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nanK
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N-acetylmannosamine kinase (EC 2.7.1.60)
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siaR
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Sialic acid utilization regulator, RpiR family
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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Position: -205
Score: 4.8 Sequence: TTTGAAGTGTTTTTTCATA
Locus tag: HI0146
Name: siaP Funciton: Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
Locus tag: HI0147
Name: siaT Funciton: TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
Locus tag: HI0148
Name: nanM Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase |
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siaP
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Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
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siaT
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TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
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nanM
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Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |