Regulon of NarP in Haemophilus influenzae Rd KW20
| Regulator type: | Transcription factor |
| TF locus tag: | HI0726 |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Regulog: | NarP - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 28 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pasteurellales
- By trascription factor - NarP
- By TF family - LuxR
- By effector - Nitrite
- By effector - Nitrate
- By pathway - Nitrate and nitrite respiration
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -151
Score: 4.6 Sequence: TAGCTTTTTTGAGGTA
Locus tag: HI0835
Name: frdA Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: HI0834
Name: frdB Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: HI0833
Name: frdC Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: HI0832
Name: frdD Funciton: Fumarate reductase subunit D (EC 1.3.5.4) |
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frdA
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Fumarate reductase subunit A (EC 1.3.5.4)
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frdB
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Fumarate reductase subunit B (EC 1.3.5.4)
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frdC
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Fumarate reductase subunit C (EC 1.3.5.4)
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frdD
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Fumarate reductase subunit D (EC 1.3.5.4)
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Position: -19
Score: 3.8 Sequence: TAACACATAAGGAGTA
Locus tag: HI1210
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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Position: -105
Score: 4.5 Sequence: TACCTATTAATGATTA
Position: -47
Score: 4.7 Sequence: TAACTCGTTTTAGTTA
Locus tag: HI1047
Name: dmsA Funciton: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Locus tag: HI1046
Name: dmsB Funciton: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-)
Locus tag: HI1045
Name: dmsC Funciton: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-)
Locus tag: HI1044
Name: dmsD Funciton: Dimethyl sulfoxide reductase chaperone protein dmsD
Locus tag: HI1043
Name: dmsX Funciton: Predicted ferredoxin |
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dmsA
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Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
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dmsB
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Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-)
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dmsC
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Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-)
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dmsD
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Dimethyl sulfoxide reductase chaperone protein dmsD
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dmsX
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Predicted ferredoxin
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Position: -48
Score: 4.6 Sequence: TAACTATAAGTAGTTA
Locus tag: HI0644
Name: torY Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: HI0643
Name: torZ Funciton: Biotin sulfoxide reductase |
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torY
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Biotin sulfoxide reductase, cytochrome c-type
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torZ
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Biotin sulfoxide reductase
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Position: -83
Score: 3.7 Sequence: CACTTTTTTATTGTTA
Locus tag: HI0884
Name: arcA Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family |
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arcA
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Anaerobic metabolism transcriptional regulator arcA, OmpR family
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Position: -84
Score: 4.6 Sequence: TACTTCTAAAGAGTTA
Locus tag: HI1089
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HI1090
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HI1091
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HI1092
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HI1093
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HI1094
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HI1095
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HI1096m
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HI1097m
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA
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ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
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ccmB
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ABC transporter involved in cytochrome c biogenesis, CcmB subunit
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ccmC
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Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
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ccmD
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Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
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ccmE
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Cytochrome c-type biogenesis protein CcmE, heme chaperone
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ccmF
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Cytochrome c heme lyase, subunit CcmF
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ccmG
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Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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Position: -99
Score: 4.7 Sequence: TACCTCTTTTTGAGTA
Locus tag: HI1069
Name: nrfA Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: HI1068
Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: HI1067
Name: nrfC Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: HI1066
Name: nrfD Funciton: Nitrite reductase, NrfD component |
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nrfA
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Nitrite reductase, cytochrome c(552)
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nrfB
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Cytochrome c-type protein NrfB precursor
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nrfC
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Nitrite reductase, Fe-S center subunit
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nrfD
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Nitrite reductase, NrfD component
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Position: -37
Score: 4.2 Sequence: TAACCCGTTTTAATTA
Position: -23
Score: 4.2 Sequence: TAACTTAATTGAGGAA
Locus tag: HI0932
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Position: -126
Score: 3.8 Sequence: TCACTAAAAAGAGGTA
Locus tag: HI0809
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |