Regulons of Idiomarina loihiensis L2TR

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis; Arginine degradation	6	10
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	5	3
TF	FabR	Unsaturated acyl-ACP; Unsaturated acyl-CoA	Fatty acid biosynthesis	7	4
TF	FadR	Palmitoyl-CoA; Oleoyl-CoA	Fatty acid degradation	7	3
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	22	22
TF	HutC	cis-Urocanic acid	Histidine utilization	3	3
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	5	5
TF	LexA	DNA damage	SOS response	8	8
TF	LiuR		Branched-chain amino acid degradation	8	3
TF	MerR	Mercury ion, (Hg2+)	Mercury resistance	1	1
TF	MetJ	S-adenosylmethionine	Methionine metabolism; Methionine biosynthesis	8	10
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	3	3
TF	PdhR	Pyruvate	Pyruvate metabolism	2	1
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	2
TF	PsrA	Oleate	Fatty acid degradation	10	7
TF	TyrR2	Tyrosine; Phenylalanine	Tyrosine degradation; Aromatic amino acid metabolism	2	3
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	3	3
RNA	TPP			2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --