Regulons of Idiomarina loihiensis L2TR
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArgR |
Arginine |
Arginine biosynthesis; Arginine degradation |
6 |
10 |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
2 |
2 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
5 |
3 |
| TF |
FabR |
Unsaturated acyl-ACP; Unsaturated acyl-CoA |
Fatty acid biosynthesis |
7 |
4 |
| TF |
FadR |
Palmitoyl-CoA; Oleoyl-CoA |
Fatty acid degradation |
7 |
3 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
22 |
22 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
3 |
3 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
5 |
5 |
| TF |
LexA |
DNA damage |
SOS response |
8 |
8 |
| TF |
LiuR |
|
Branched-chain amino acid degradation |
8 |
3 |
| TF |
MerR |
Mercury ion, (Hg2+) |
Mercury resistance |
1 |
1 |
| TF |
MetJ |
S-adenosylmethionine |
Methionine metabolism; Methionine biosynthesis |
8 |
10 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
4 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
3 |
3 |
| TF |
PdhR |
Pyruvate |
Pyruvate metabolism |
2 |
1 |
| TF |
PrpR |
2-methylcitrate |
Methylcitrate utilization |
2 |
2 |
| TF |
PsrA |
Oleate |
Fatty acid degradation |
10 |
7 |
| TF |
TyrR2 |
Tyrosine; Phenylalanine |
Tyrosine degradation; Aromatic amino acid metabolism |
2 |
3 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
3 |
3 |
| RNA |
TPP |
|
|
2 |
2 |
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Regulated Genes
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