Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Idiomarina loihiensis L2TR

Properties
Regulator type: Transcription factor
TF locus tag: IL1476
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Alteromonadales
Statistics of regulated genes:
- Genes 29
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 142 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 4.8
Sequence: AAATGCAAATGATAATGATTA
Position: -46
Score: 5.4
Sequence: AAATGATAATGATTACCGTTA
Locus tag: IL0798
Name: sodA
Funciton: Manganese superoxide dismutase (EC 1.15.1.1)
Locus tag: IL0799
Name: null
Funciton: Metal transporter, ZIP family
IL0798
sodA
Manganese superoxide dismutase (EC 1.15.1.1)
IL0799
Metal transporter, ZIP family
Position: -84
Score: 5.5
Sequence: AAATGAGAATGGCTATCATTA
Locus tag: IL1059
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
Locus tag: IL1060
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Locus tag: IL1061
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
IL1059
fbpA
Ferric iron ABC transporter, iron-binding protein
IL1060
fbpB
Ferric iron ABC transporter, permease protein
IL1061
fbpC
Ferric iron ABC transporter, ATP-binding protein
Position: -88
Score: 5.5
Sequence: TATTGCGAATCATTCTTATTT
Locus tag: IL2393
Name: fecA
Funciton: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
IL2393
fecA
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
Position: -87
Score: 5.5
Sequence: AAACGAAAATGATTTGCATTT
Locus tag: IL0113
Name: hmuT
Funciton: Hemin ABC transporter, periplasmic component
Locus tag: IL0114
Name: hmuU
Funciton: Hemin ABC transporter, permease protein
Locus tag: IL0115
Name: hmuV
Funciton: Hemin ABC transporter, ATP-binding protein
Locus tag: IL0116
Name: COG0748
Funciton: Putative heme iron utilization protein
IL0113
hmuT
Hemin ABC transporter, periplasmic component
IL0114
hmuU
Hemin ABC transporter, permease protein
IL0115
hmuV
Hemin ABC transporter, ATP-binding protein
IL0116
COG0748
Putative heme iron utilization protein
Position: -66
Score: 5.2
Sequence: AAATGATAACGATTCGTAGTT
Locus tag: IL1581
Name: fhuE_1
Funciton: Putative OMR family iron-siderophore receptor precursor
IL1581
fhuE_1
Putative OMR family iron-siderophore receptor precursor
Position: -57
Score: 5.2
Sequence: TATTGCAAATCGTTCGCATTT
Locus tag: IL1065
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: IL1066
Name: bfr2
Funciton: Bacterioferritin, subunit 2
Locus tag: IL1067
Name: bfr1
Funciton: Bacterioferritin subunit 1
IL1065
bfd
Bacterioferritin-associated ferredoxin
IL1066
bfr2
Bacterioferritin, subunit 2
IL1067
bfr1
Bacterioferritin subunit 1
Position: -36
Score: 5.2
Sequence: AAATGATAACTATTCGCAAGT
Locus tag: IL0759
Name: piuC
Funciton: Iron-uptake factor PiuC
IL0759
piuC
Iron-uptake factor PiuC
Position: -85
Score: 5.2
Sequence: AAACAACAATAGTTATCATTT
Locus tag: IL0111
Name: ftr1
Funciton: High-affinity Fe2+/Pb2+ permease
IL0111
ftr1
High-affinity Fe2+/Pb2+ permease
Position: -85
Score: 5.4
Sequence: AAATGAGAATTGTTCGCAACA
Position: -58
Score: 5.1
Sequence: ATTTGATAATTGTTCGTATTT
Locus tag: IL2512
Name: null
Funciton: putative iron-regulated membrane protein
Locus tag: IL2513
Name: null
Funciton: hypothetical protein
IL2512
putative iron-regulated membrane protein
IL2513
hypothetical protein
Position: -177
Score: 5.5
Sequence: TATTGATACTGATTCTCATTT
Locus tag: IL0109
Name: null
Funciton: Probable TonB-dependent receptor
IL0109
Probable TonB-dependent receptor
Position: -67
Score: 6
Sequence: AATTGATAATAGTTATCATTA
Locus tag: IL0795
Name: null
Funciton: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
IL0795
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Position: -52
Score: 4.7
Sequence: ACAATATAATCATTCTCATTT
Locus tag: IL0069
Name: piu
Funciton: Putaive Fe-regulated protein B
IL0069
piu
Putaive Fe-regulated protein B
Position: -66
Score: 5.4
Sequence: AAACGCGAATCGTTTTCATTT
Locus tag: IL2514
Name: fhuA
Funciton: Ferrichrome-iron receptor
IL2514
fhuA
Ferrichrome-iron receptor
Position: -42
Score: 6
Sequence: TAATGAAAATAATTCGCATTT
Locus tag: IL2490
Name: irgA
Funciton: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
IL2490
irgA
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
Position: -89
Score: 5.9
Sequence: AAATGAGAATTTTTATCATTA
Position: -60
Score: 5.5
Sequence: AAATGAGAACGGTTTTTATAT
Locus tag: IL2502
Name: CPS_1855
Funciton: conserved protein of unknown function; putative membrane-associated protein
Locus tag: IL2503
Name: ATW7_15889
Funciton: Uncharacterized metal-binding protein
IL2502
CPS_1855
conserved protein of unknown function; putative membrane-associated protein
IL2503
ATW7_15889
Uncharacterized metal-binding protein
Position: -105
Score: 6.2
Sequence: AAATGATAATGGTTTTCATTA
Locus tag: IL1578
Name: null
Funciton: putative iron-regulated membrane protein
IL1578
putative iron-regulated membrane protein
Position: -104
Score: 5.5
Sequence: ATATAAAAACCGTTCTCATTT
Position: -75
Score: 5.9
Sequence: TAATGATAAAAATTCTCATTT
Locus tag: IL2501
Name: fpr
Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
IL2501
fpr
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Position: -59
Score: 6.2
Sequence: TAATGAAAACCATTATCATTT
Locus tag: IL1577
Name: Patl_1817
Funciton: Uncharacterized protein conserved in bacteria
Locus tag: IL1576
Name: MADE_01572
Funciton: TonB-dependent receptor, putative
IL1577
Patl_1817
Uncharacterized protein conserved in bacteria
IL1576
MADE_01572
TonB-dependent receptor, putative
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