Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Idiomarina loihiensis L2TR

Properties
Regulator type: Transcription factor
TF locus tag: IL1476
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Alteromonadales
Statistics of regulated genes:
- Genes 29
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 142 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -52
Score: 4.8
Sequence: AAATGCAAATGATAATGATTA
Position: -46
Score: 5.4
Sequence: AAATGATAATGATTACCGTTA
Locus tag: IL0798
Name: sodA
Funciton: Manganese superoxide dismutase (EC 1.15.1.1)
Locus tag: IL0799
Name: null
Funciton: Metal transporter, ZIP family
sodA
Manganese superoxide dismutase (EC 1.15.1.1)
Metal transporter, ZIP family

Position: -84
Score: 5.5
Sequence: AAATGAGAATGGCTATCATTA
Locus tag: IL1059
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
Locus tag: IL1060
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Locus tag: IL1061
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
fbpA
Ferric iron ABC transporter, iron-binding protein
fbpB
Ferric iron ABC transporter, permease protein
fbpC
Ferric iron ABC transporter, ATP-binding protein

Position: -88
Score: 5.5
Sequence: TATTGCGAATCATTCTTATTT
Locus tag: IL2393
Name: fecA
Funciton: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
fecA
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins

Position: -87
Score: 5.5
Sequence: AAACGAAAATGATTTGCATTT
Locus tag: IL0113
Name: hmuT
Funciton: Hemin ABC transporter, periplasmic component
Locus tag: IL0114
Name: hmuU
Funciton: Hemin ABC transporter, permease protein
Locus tag: IL0115
Name: hmuV
Funciton: Hemin ABC transporter, ATP-binding protein
Locus tag: IL0116
Name: COG0748
Funciton: Putative heme iron utilization protein
hmuT
Hemin ABC transporter, periplasmic component
hmuU
Hemin ABC transporter, permease protein
hmuV
Hemin ABC transporter, ATP-binding protein
COG0748
Putative heme iron utilization protein

Position: -66
Score: 5.2
Sequence: AAATGATAACGATTCGTAGTT
Locus tag: IL1581
Name: fhuE_1
Funciton: Putative OMR family iron-siderophore receptor precursor
fhuE_1
Putative OMR family iron-siderophore receptor precursor

Position: -57
Score: 5.2
Sequence: TATTGCAAATCGTTCGCATTT
Locus tag: IL1065
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: IL1066
Name: bfr2
Funciton: Bacterioferritin, subunit 2
Locus tag: IL1067
Name: bfr1
Funciton: Bacterioferritin subunit 1
bfd
Bacterioferritin-associated ferredoxin
bfr2
Bacterioferritin, subunit 2
bfr1
Bacterioferritin subunit 1

Position: -36
Score: 5.2
Sequence: AAATGATAACTATTCGCAAGT
Locus tag: IL0759
Name: piuC
Funciton: Iron-uptake factor PiuC
piuC
Iron-uptake factor PiuC

Position: -85
Score: 5.2
Sequence: AAACAACAATAGTTATCATTT
Locus tag: IL0111
Name: ftr1
Funciton: High-affinity Fe2+/Pb2+ permease
ftr1
High-affinity Fe2+/Pb2+ permease

Position: -85
Score: 5.4
Sequence: AAATGAGAATTGTTCGCAACA
Position: -58
Score: 5.1
Sequence: ATTTGATAATTGTTCGTATTT
Locus tag: IL2512
Name: null
Funciton: putative iron-regulated membrane protein
Locus tag: IL2513
Name: null
Funciton: hypothetical protein
putative iron-regulated membrane protein
hypothetical protein

Position: -177
Score: 5.5
Sequence: TATTGATACTGATTCTCATTT
Locus tag: IL0109
Name: null
Funciton: Probable TonB-dependent receptor
Probable TonB-dependent receptor

Position: -67
Score: 6
Sequence: AATTGATAATAGTTATCATTA
Locus tag: IL0795
Name: null
Funciton: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Position: -52
Score: 4.7
Sequence: ACAATATAATCATTCTCATTT
Locus tag: IL0069
Name: piu
Funciton: Putaive Fe-regulated protein B
piu
Putaive Fe-regulated protein B

Position: -66
Score: 5.4
Sequence: AAACGCGAATCGTTTTCATTT
Locus tag: IL2514
Name: fhuA
Funciton: Ferrichrome-iron receptor
fhuA
Ferrichrome-iron receptor

Position: -42
Score: 6
Sequence: TAATGAAAATAATTCGCATTT
Locus tag: IL2490
Name: irgA
Funciton: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
irgA
TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins

Position: -89
Score: 5.9
Sequence: AAATGAGAATTTTTATCATTA
Position: -60
Score: 5.5
Sequence: AAATGAGAACGGTTTTTATAT
Locus tag: IL2502
Name: CPS_1855
Funciton: conserved protein of unknown function; putative membrane-associated protein
Locus tag: IL2503
Name: ATW7_15889
Funciton: Uncharacterized metal-binding protein
CPS_1855
conserved protein of unknown function; putative membrane-associated protein
ATW7_15889
Uncharacterized metal-binding protein

Position: -105
Score: 6.2
Sequence: AAATGATAATGGTTTTCATTA
Locus tag: IL1578
Name: null
Funciton: putative iron-regulated membrane protein
putative iron-regulated membrane protein

Position: -104
Score: 5.5
Sequence: ATATAAAAACCGTTCTCATTT
Position: -75
Score: 5.9
Sequence: TAATGATAAAAATTCTCATTT
Locus tag: IL2501
Name: fpr
Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
fpr
Ferredoxin--NADP(+) reductase (EC 1.18.1.2)

Position: -59
Score: 6.2
Sequence: TAATGAAAACCATTATCATTT
Locus tag: IL1577
Name: Patl_1817
Funciton: Uncharacterized protein conserved in bacteria
Locus tag: IL1576
Name: MADE_01572
Funciton: TonB-dependent receptor, putative
Patl_1817
Uncharacterized protein conserved in bacteria
MADE_01572
TonB-dependent receptor, putative
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