Regulon of IscR in Idiomarina loihiensis L2TR

Properties
Regulator type:	Transcription factor
TF locus tag:	IL2041
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Alteromonadales
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 43 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -44 Score: 5 Sequence: ATACCTGAGTGTTTTAATCAACCAT Locus tag: IL1804 Name: ydhD Funciton: Probable monothiol glutaredoxin ydhD
	IL1804	ydhD	Probable monothiol glutaredoxin ydhD
Position: -86 Score: 5.9 Sequence: AAAGTTGAGTGTTTTAGTCAGGTAT Locus tag: IL0154 Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB Locus tag: IL0153 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC Locus tag: IL0152 Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD Locus tag: IL0151 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Locus tag: IL0150 Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly Locus tag: IL0149 Name: sufT Funciton: Iron sulfur cluster assembly protein SufT Locus tag: IL0148 Name: sufE Funciton: Sulfur acceptor protein SufE for iron-sulfur cluster assembly
	IL0154	sufB	Iron-sulfur cluster assembly protein SufB
	IL0153	sufC	Iron-sulfur cluster assembly ATPase protein SufC
	IL0152	sufD	Iron-sulfur cluster assembly protein SufD
	IL0151	sufS	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	IL0150	sufA	Iron binding protein SufA for iron-sulfur cluster assembly
	IL0149	sufT	Iron sulfur cluster assembly protein SufT
	IL0148	sufE	Sulfur acceptor protein SufE for iron-sulfur cluster assembly
Position: -64 Score: 6.9 Sequence: ATACTTGACCAAAATACTCAGGTAA Locus tag: IL2240 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	IL2240	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
Position: -45 Score: 6.3 Sequence: ATACCCTAGTAATTTACTCAGGTAT Locus tag: IL0248 Name: nfuA Funciton: NfuA Fe-S protein maturation
	IL0248	nfuA	NfuA Fe-S protein maturation
Position: -74 Score: 7 Sequence: ATACTTGACTAAAATAGTCGGGAAT Locus tag: IL2041 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: IL2040 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	IL2041	iscR	Iron-sulfur cluster regulator IscR
	IL2040	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD