Regulon of IscR in Idiomarina loihiensis L2TR
| Regulator type: | Transcription factor |
| TF locus tag: | IL2041 |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Regulog: | IscR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - IscR
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By pathway - Iron-sulfur cluster biogenesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -44
Score: 5 Sequence: ATACCTGAGTGTTTTAATCAACCAT
Locus tag: IL1804
Name: ydhD Funciton: Probable monothiol glutaredoxin ydhD |
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ydhD
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Probable monothiol glutaredoxin ydhD
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Position: -86
Score: 5.9 Sequence: AAAGTTGAGTGTTTTAGTCAGGTAT
Locus tag: IL0154
Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: IL0153
Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: IL0152
Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: IL0151
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: IL0150
Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
Locus tag: IL0149
Name: sufT Funciton: Iron sulfur cluster assembly protein SufT
Locus tag: IL0148
Name: sufE Funciton: Sulfur acceptor protein SufE for iron-sulfur cluster assembly |
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sufB
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Iron-sulfur cluster assembly protein SufB
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sufC
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Iron-sulfur cluster assembly ATPase protein SufC
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sufD
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Iron-sulfur cluster assembly protein SufD
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sufS
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Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
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sufA
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Iron binding protein SufA for iron-sulfur cluster assembly
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sufT
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Iron sulfur cluster assembly protein SufT
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sufE
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Sulfur acceptor protein SufE for iron-sulfur cluster assembly
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Position: -64
Score: 6.9 Sequence: ATACTTGACCAAAATACTCAGGTAA
Locus tag: IL2240
Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family |
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erpA
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ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
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Position: -45
Score: 6.3 Sequence: ATACCCTAGTAATTTACTCAGGTAT
Locus tag: IL0248
Name: nfuA Funciton: NfuA Fe-S protein maturation |
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nfuA
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NfuA Fe-S protein maturation
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Position: -74
Score: 7 Sequence: ATACTTGACTAAAATAGTCGGGAAT
Locus tag: IL2041
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: IL2040
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily |
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iscR
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Iron-sulfur cluster regulator IscR
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iscS
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Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |