Regulon of TyrR2 in Idiomarina loihiensis L2TR
| Regulator type: | Transcription factor |
| TF locus tag: | IL0723 |
| Regulator family: | TyrR |
| Regulation mode: | activator (repressor) |
| Biological process: | Tyrosine degradation; Aromatic amino acid metabolism |
| Effector: | Tyrosine; Phenylalanine |
| Regulog: | TyrR2 - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TyrR
- By taxonomy - Alteromonadales
- By TF family - TyrR
- By effector - Tyrosine
- By effector - Phenylalanine
- By pathway - Tyrosine degradation
- By pathway - Aromatic amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -119
Score: 5.2 Sequence: GTGGAAAACTAGCGTTACAG
Locus tag: IL0726
Name: mdeA Funciton: Methionine gamma-lyase (EC 4.4.1.11)
Locus tag: IL0725
Name: phhA Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Locus tag: IL0724
Name: phhB Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Locus tag: IL0723
Name: tyrR2 Funciton: Tyrosine and phenylalanine degradation transcriptional activator, TyrR family |
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mdeA
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Methionine gamma-lyase (EC 4.4.1.11)
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phhA
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Phenylalanine-4-hydroxylase (EC 1.14.16.1)
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phhB
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Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
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tyrR2
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Tyrosine and phenylalanine degradation transcriptional activator, TyrR family
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Position: -188
Score: 5.5 Sequence: TTGTAACAAAAGCTTTACAA
Position: -128
Score: 4.9 Sequence: CTGTACATTAAACTTTACGT
Locus tag: IL0722
Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Locus tag: IL0721
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: IL0720
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: IL0719
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hpd
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4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
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hmgA
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Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
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hmgC
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Fumarylacetoacetase (EC 3.7.1.2)
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hmgB
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Maleylacetoacetate isomerase (EC 5.2.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |