Regulons of Bordetella avium 197N

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BAV2320			3	3
TF	BAV2585		Nitrogen metabolism	3	2
TF	BAV2922		Metabolite transport	1	1
TF	FdsR	Formate	Formate oxydation	2	3
TF	GabR	Gamma-aminobutyric acid	Gamma-aminobutyrate utilization	3	3
TF	HrcA	Heat shock	Heat shock response	2	2
TF	LexA	DNA damage	SOS response	7	7
TF	MetR	Homocysteine	Methionine biosynthesis	3	4
TF	ModE	Molybdate	Molybdopterin biosynthesis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	OapR		Gamma-aminobutyrate utilization	1	1
TF	PdxR		Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxR2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	2	1
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PrpR	2-methylcitrate	Methylcitrate utilization	3	8
TF	SdhR		Tricarboxylic acid cycle	4	4
TF	UxuR2		Glucuronate utilization; Galacturonate utilization	3	1

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --