Regulon of SdhR in Bordetella avium 197N

Properties
Regulator type:	Transcription factor
TF locus tag:	BAV1181
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Alcaligenaceae
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 14 sites [see more]

Member of regulog collections

By taxonomy - Alcaligenaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -124 Score: 6.4 Sequence: TCCCAGGTCTTATATAAGATAAAAGA Locus tag: BAV2514 Name: acnA Funciton: Aconitate hydratase (EC 4.2.1.3)
	BAV2514	acnA	Aconitate hydratase (EC 4.2.1.3)
Position: -97 Score: 6.6 Sequence: CCACAGGTCTTATATAAGATATAAGA Locus tag: BAV2509 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	BAV2509	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -184 Score: 7.8 Sequence: TCTTATATCTTATATAAGACATAAGA Locus tag: BAV1181 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: BAV1182 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: BAV1183 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: BAV1184 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: BAV1185 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: BAV1186 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: BAV1187 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	BAV1181	sdhR	Transcriptional regulator of TCA cycle, GntR family
	BAV1182	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	BAV1183	sdhD	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
	BAV1184	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	BAV1185	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	BAV1186	COG2938	succinate dehydrogenase iron-sulfur subunit
	BAV1187	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -159 Score: 7.8 Sequence: TCTTATGTCTTATATAAGATATAAGA Locus tag: BAV1180 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	BAV1180	mdh	Malate dehydrogenase (EC 1.1.1.37)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD