Regulon of PrpR in Bordetella avium 197N
| Regulator type: | Transcription factor |
| TF locus tag: | BAV2731, BAV0624 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Regulog: | PrpR - Alcaligenaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alcaligenaceae
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -75
Score: 4.9 Sequence: ATTGTTGACAAT
Position: -12
Score: 4.2 Sequence: ATTGTCAACACA
Locus tag: BAV2731
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: BAV2732
Name: acnD Funciton: Aconitate hydratase (EC 4.2.1.3)/2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: BAV2733
Name: BAV2733 Funciton: PrpF protein involved in 2-methylcitrate cycle |
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prpR
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Propionate catabolism transcriptional regulator, GntR family
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acnD
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Aconitate hydratase (EC 4.2.1.3)/2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
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BAV2733
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PrpF protein involved in 2-methylcitrate cycle
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Position: -261
Score: 4.2 Sequence: AGTGTTAACAGC
Position: -230
Score: 4.6 Sequence: AGTGTCAACTCT
Position: -32
Score: 5 Sequence: AGTGTTGACACT
Locus tag: BAV0625
Name: acnA Funciton: Aconitate hydratase (EC 4.2.1.3) |
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acnA
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Aconitate hydratase (EC 4.2.1.3)
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Position: -241
Score: 5 Sequence: AGTGTCAACACT
Position: -43
Score: 4.6 Sequence: AGAGTTGACACT
Position: -12
Score: 4.2 Sequence: GCTGTTAACACT
Locus tag: BAV0624
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: BAV0623
Name: BAV0623 Funciton: carboxyvinyl-carboxyphosphonate phosphorylmutase( EC:2.7.8.23 ) |
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prpR
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Propionate catabolism transcriptional regulator, GntR family
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BAV0623
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carboxyvinyl-carboxyphosphonate phosphorylmutase( EC:2.7.8.23 )
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |