Regulon of GabR in Bordetella avium 197N

Properties
Regulator type:	Transcription factor
TF locus tag:	BAV2547, BAV2194, BAV0456
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Gamma-aminobutyrate utilization
Effector:	Gamma-aminobutyric acid
Regulog:	GabR - Alcaligenaceae
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 7 sites [see more]

Member of regulog collections

By taxonomy - Alcaligenaceae
By TF family - GntR/MocR
By effector - Gamma-aminobutyric acid
By pathway - Gamma-aminobutyrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -356 Score: 10.8 Sequence: GTGGCAC-(17)-TTGGATC-(8)-GTACCAA Locus tag: BAV2195 Name: dppA Funciton: ABC-type peptide transporter, periplasmic oligopeptide-binding protein Locus tag: BAV2196 Name: dppB Funciton: ABC-type peptide transport system permease protein Locus tag: BAV2197 Name: dppC Funciton: ABC-type peptide transport system permease protein Locus tag: BAV2198 Name: dppD Funciton: ABC-type peptide transporter, ATP-binding protein Locus tag: BAV2199 Name: gabT2 Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
	BAV2195	dppA	ABC-type peptide transporter, periplasmic oligopeptide-binding protein
	BAV2196	dppB	ABC-type peptide transport system permease protein
	BAV2197	dppC	ABC-type peptide transport system permease protein
	BAV2198	dppD	ABC-type peptide transporter, ATP-binding protein
	BAV2199	gabT2	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Position: -138 Score: 11.8 Sequence: TTGGTTC-(16)-GTGGTTC-(9)-GGGCCAT Locus tag: BAV2548 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: BAV2549 Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
	BAV2548	gabT	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
	BAV2549	gabD	Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
Position: -89 Score: 9.9 Sequence: GTGGCTA-(16)-CTGGCTA-(9)-GGGCCAG Locus tag: BAV0460 Name: argE Funciton: Acetylornithine deacetylase (EC 3.5.1.16) Locus tag: BAV0461 Name: null Funciton: aminoglycoside phosphotransferase Locus tag: BAV0462 Name: gabT3 Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
	BAV0460	argE	Acetylornithine deacetylase (EC 3.5.1.16)
	BAV0461		aminoglycoside phosphotransferase
	BAV0462	gabT3	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD