# TF - SdhR: BAV1181
>BAV1181(sdhR) Score=7.8 Pos=-184 [Bordetella avium 197N]
TCTTATATCTTATATAAGACATAAGA
>BAV1180(mdh) Score=7.8 Pos=-159 [Bordetella avium 197N]
TCTTATGTCTTATATAAGATATAAGA
>BAV2514(acnA) Score=6.4 Pos=-124 [Bordetella avium 197N]
TCCCAGGTCTTATATAAGATAAAAGA
>BAV2509(acnB) Score=6.6 Pos=-97 [Bordetella avium 197N]
CCACAGGTCTTATATAAGATATAAGA
# TF - PdxR2: BAV1602
>BAV1600(COG0325) Score=5.7 Pos=-71 [Bordetella avium 197N]
TTTGACCTAGGACAAA
# TF - ModE: BAV2465
>BAV2468(modA) Score=6.8 Pos=-65 [Bordetella avium 197N]
ATCGTTATATACAAGGCTATATTTCGAT
# TF - PrpR: BAV2731, BAV0624
>BAV2731(prpR) Score=4.2 Pos=-12 [Bordetella avium 197N]
ATTGTCAACACA
>BAV2731(prpR) Score=4.9 Pos=-75 [Bordetella avium 197N]
ATTGTTGACAAT
>BAV0625(acnA) Score=5 Pos=-32 [Bordetella avium 197N]
AGTGTTGACACT
>BAV0625(acnA) Score=4.2 Pos=-261 [Bordetella avium 197N]
AGTGTTAACAGC
>BAV0625(acnA) Score=4.6 Pos=-230 [Bordetella avium 197N]
AGTGTCAACTCT
>BAV0624(prpR) Score=5 Pos=-241 [Bordetella avium 197N]
AGTGTCAACACT
>BAV0624(prpR) Score=4.2 Pos=-12 [Bordetella avium 197N]
GCTGTTAACACT
>BAV0624(prpR) Score=4.6 Pos=-43 [Bordetella avium 197N]
AGAGTTGACACT
# TF - BAV2585: BAV2585
>BAV0804(ucaB) Score=4.1 Pos=-26 [Bordetella avium 197N]
ACATGTATACCACT
>BAV2580(BAV2580) Score=4.1 Pos=-49 [Bordetella avium 197N]
ATCGGTATACAAGC
# TF - NrdR: BAV2960
>BAV2982(nrdA) Score=5.5 Pos=-185 [Bordetella avium 197N]
TCACTAGAATTAGTGC
>BAV2982(nrdA) Score=5.5 Pos=-154 [Bordetella avium 197N]
ACACTATATATTGTGT
# TF - GabR: BAV2547, BAV2194, BAV0456
>BAV2195(dppA) Score=10.8 Pos=-356 [Bordetella avium 197N]
GTGGCAC-(17)-TTGGATC-(8)-GTACCAA
>BAV2548(gabT) Score=11.8 Pos=-138 [Bordetella avium 197N]
TTGGTTC-(16)-GTGGTTC-(9)-GGGCCAT
>BAV0460(argE) Score=9.9 Pos=-89 [Bordetella avium 197N]
GTGGCTA-(16)-CTGGCTA-(9)-GGGCCAG
# TF - PdxW: BAV1623
>BAV1624(PF00583) Score=12.9 Pos=-106 [Bordetella avium 197N]
CGTGGCACCTA-(13)-TATGGTGCTTT-(2)-ATAATGCCACG
# TF - FdsR: BAV0819
>BAV0819(fdsR) Score=5.9 Pos=-82 [Bordetella avium 197N]
ATATGTTTATTTTTACATAT
>BAV0818(fdsG) Score=5.9 Pos=-145 [Bordetella avium 197N]
ATATGTTATTTCTTGCATAT
>BAV0818(fdsG) Score=5.9 Pos=-65 [Bordetella avium 197N]
ATATGTAAAAATAAACATAT
# TF - HrcA: BAV2721
>BAV0580(groS) Score=7.9 Pos=-85 [Bordetella avium 197N]
TTAGCACTCGTCGCCGGTGAGTGCTAA
>BAV3285(rpoH) Score=7.2 Pos=-37 [Bordetella avium 197N]
TTAGCACTCAACCATTTGGAGTGCTAA
# TF - LexA: BAV1503
>BAV2027(imuA) Score=6.4 Pos=-39 [Bordetella avium 197N]
TACTGTATATTCATACAGTA
>BAV2545(uvrD) Score=5.7 Pos=-27 [Bordetella avium 197N]
GTCTGTATATATATACAGTG
>BAV2808(uvrA) Score=5.8 Pos=-134 [Bordetella avium 197N]
TACTGTTTATCTATACAGCA
>BAV2309(recA) Score=5.8 Pos=-172 [Bordetella avium 197N]
TACTGTTTGTTTGTACAGTA
>BAV1370(PF4055) Score=5.7 Pos=-28 [Bordetella avium 197N]
TACTGTGTTTTTGTACAGTA
>BAV1503(lexA) Score=5.5 Pos=-62 [Bordetella avium 197N]
CGCTGTATATACATACAGTC
>BAV2034(dinB) Score=5.9 Pos=-44 [Bordetella avium 197N]
TACCGTATATTTATCCAGTA
# TF - OapR: BAV0505
>BAV0504(oapT) Score=13.9 Pos=-192 [Bordetella avium 197N]
ATCTGTACAGTT-(11)-ACCAATACAGCT-(15)-GATTGTATATTT
# TF - BAV2922: BAV2922
>BAV2923(PF00892) Score=18.5 Pos=-95 [Bordetella avium 197N]
TAACTGTCATG-(10)-CAGGCCAGTGA-(15)-CAAGTGTATCG-(0)-GTACTGTATCG
# TF - PdxR: BAV1500
>BAV1501(PF03594) Score=13.6 Pos=-109 [Bordetella avium 197N]
AATTGGCCGG-(13)-AAATGGATGG-(6)-CAGTCCATTT
# TF - BAV2320: BAV2320
>BAV2320(BAV2320) Score=14.8 Pos=-119 [Bordetella avium 197N]
ACAGTCACACGCCA-(11)-GACACAACAGACGG-(8)-CGTTCTGTTATGGT-(11)-TAGCCTGTGTCTGT
>BAV2319 Score=18.3 Pos=-118 [Bordetella avium 197N]
ACAGACACAGGCTA-(11)-ACCATAACAGAACG-(8)-CCGTCTGTTGTGTC-(11)-TGGCGTGTGACTGT
>BAV2318(BAV2318) Score=18.3 Pos=-683 [Bordetella avium 197N]
ACAGACACAGGCTA-(11)-ACCATAACAGAACG-(8)-CCGTCTGTTGTGTC-(11)-TGGCGTGTGACTGT
# TF - UxuR2: BAV1879
>BAV1879(uxuR2) Score=4.6 Pos=-40 [Bordetella avium 197N]
CCAGTGGCCTGACCACTGA
# TF - MetR: BAV2307
>BAV2306(metE) Score=5.2 Pos=-108 [Bordetella avium 197N]
ATGAATACTTCTCAA
>BAV2306(metE) Score=5.2 Pos=0 [Bordetella avium 197N]
ATGACTATTACTCAT
>BAV2307(metR) Score=5.2 Pos=-154 [Bordetella avium 197N]
ATGAGTAATAGTCAT
>BAV2307(metR) Score=5.2 Pos=-46 [Bordetella avium 197N]
TTGAGAAGTATTCAT