Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Bordetella avium 197N

Properties
Regulator type: Transcription factor
TF locus tag: BAV1503
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Alcaligenaceae
Statistics of regulated genes:
- Genes 12
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -134
Score: 5.8
Sequence: TACTGTTTATCTATACAGCA
Locus tag: BAV2808
Name: uvrA
Funciton: Excinuclease ABC subunit A
Locus tag: BAV2809
Name: pabB
Funciton: Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
Locus tag: BAV2810
Name: pabC
Funciton: Aminodeoxychorismate lyase (EC 4.1.3.38)
uvrA
Excinuclease ABC subunit A
pabB
Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
pabC
Aminodeoxychorismate lyase (EC 4.1.3.38)

Position: -44
Score: 5.9
Sequence: TACCGTATATTTATCCAGTA
Locus tag: BAV2034
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)

Position: -172
Score: 5.8
Sequence: TACTGTTTGTTTGTACAGTA
Locus tag: BAV2309
Name: recA
Funciton: Recombinase A
Locus tag: BAV2308
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -27
Score: 5.7
Sequence: GTCTGTATATATATACAGTG
Locus tag: BAV2545
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -39
Score: 6.4
Sequence: TACTGTATATTCATACAGTA
Locus tag: BAV2027
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: BAV2028
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: BAV2029
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -62
Score: 5.5
Sequence: CGCTGTATATACATACAGTC
Locus tag: BAV1503
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -28
Score: 5.7
Sequence: TACTGTGTTTTTGTACAGTA
Locus tag: BAV1370
Name: PF4055
Funciton: DNA repair photolyase
PF4055
DNA repair photolyase
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD