Profile of regulator PdxR3 in Nocardiaceae
Properties
| Regulator family: |
GntR/MocR |
| Regulation mode: |
|
| Biological process: |
Pyridoxine/pyridoxal homeostasis |
| Effector: |
|
| Regulog: |
PdxR3 - Nocardiaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Nocardia farcinica IFM 10152
|
|
nfa53680 |
COG0350 |
-67 |
5.7 |
AGTCCAGTTTCGAAAAACTGGACT |
|
nfa53660 |
pdxR3 |
-26 |
4.9 |
TAGCCAATCCGCGAATACTGGACT |
|
Rhodococcus erythropolis PR4
|
|
RER_14310 |
pdxR3 |
-26 |
4.7 |
TAGCCAAGTTGTCGATACTGGACT |
|
RER_23600 |
COG2364 |
-93 |
3.3 |
ATGCGGGCTTCACGGAAGTGGCAC |
|
RER_23600 |
COG2364 |
-23 |
4.7 |
AGTCCAGTATCGACAACTTGGCTA |
|
Rhodococcus opacus B4
|
|
ROP_65020 |
COG2364 |
-160 |
3.6 |
GGTCCAGTAACGCCGACATGGCTA |
|
ROP_56230 |
COG0350 |
-137 |
4 |
AGTCCAGAAGATCCGGACTGGACC |
|
ROP_56250 |
pdxR3 |
-239 |
4 |
GGTCCAGTCCGGATCTTCTGGACT |
|
ROP_56250 |
pdxR3 |
-29 |
4.1 |
TAGCCAAGGGGGTGATACTGGACT |
|
ROP_65020 |
COG2364 |
-238 |
3.5 |
ACGCCGGCTTCACGGAGGTGGCAC |
|
ROP_64330 |
pdxR3 |
-200 |
3.2 |
CGGCCAGCCGTTGTATCGCGGGCT |
|
Rhodococcus sp. RHA1
|
|
RHA1_ro05556 |
pdxR3 |
-236 |
3.8 |
AGGCCAGTGCGGATCTTCTGGACT |
|
RHA1_ro05556 |
pdxR3 |
-26 |
3.9 |
TAGCCAAGAGGTTGATACTGGACT |
|
RHA1_ro06371 |
pdxR3 |
-26 |
3.5 |
CAGTCCTCTGTGGAAAAGTGGCCT |
|
RHA1_ro06449 |
COG2364 |
-6 |
3.9 |
GGTCCAGTGCCTGCGTGGTGGCTA |
|
RHA1_ro06449 |
COG2364 |
-78 |
3.7 |
ACGCCGGTTTCACCGAGGTGGCTC |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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