Regulon of HrcA in Fervidobacterium nodosum Rt17-B1

Properties
Regulator type:	Transcription factor
TF locus tag:	Fnod_1242
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Thermotogales
Statistics of regulated genes:
- Genes	10
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 50 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -244 Score: 5.7 Sequence: TTATCATTATTAAGTTACAACTGATAA Position: -141 Score: 6.5 Sequence: TTATCACTCTTGACAATTGAGTGATAA Locus tag: Fnod_0102 Name: hsp20 Funciton: Chaperone Hsp20
	Fnod_0102	hsp20	Chaperone Hsp20
Position: -93 Score: 5.8 Sequence: TTATCACTCCATCTTGTCAAGTGATAA Locus tag: Fnod_1362 Name: recF Funciton: DNA replication and repair protein RecF Locus tag: Fnod_1363 Name: rgyR Funciton: Reverse gyrase
	Fnod_1362	recF	DNA replication and repair protein RecF
	Fnod_1363	rgyR	Reverse gyrase
Position: -61 Score: 5.8 Sequence: TTAACAAACGGAATATTAGAGTGATAA Locus tag: Fnod_1544 Name: groS Funciton: GroES chaperonin Locus tag: Fnod_1543 Name: groL Funciton: GroEL chaperonin
	Fnod_1544	groS	GroES chaperonin
	Fnod_1543	groL	GroEL chaperonin
Position: -103 Score: 5.1 Sequence: TTGGCAGATGGATAATAAGTTTGCTAA Locus tag: Fnod_1242 Name: hrcA Funciton: Heat shock response regulator, HrcA family Locus tag: Fnod_1243 Name: grpE Funciton: Heat shock protein Locus tag: Fnod_1244 Name: dnaJ Funciton: Chaperone Hsp40
	Fnod_1242	hrcA	Heat shock response regulator, HrcA family
	Fnod_1243	grpE	Heat shock protein
	Fnod_1244	dnaJ	Chaperone Hsp40
Position: -85 Score: 6 Sequence: ATATCACTCTTGACATATAAGTGATAA Locus tag: Fnod_0310 Name: clpB Funciton: Chaperone protein
	Fnod_0310	clpB	Chaperone protein
Position: -82 Score: 6.4 Sequence: TTATCACTCTTGACAAATGATTGCTAA Locus tag: Fnod_1209 Name: dnaK Funciton: Chaperone Hsp70
	Fnod_1209	dnaK	Chaperone Hsp70

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD