Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HrcA in Thermosipho melanesiensis BI429

Properties
Regulator type: Transcription factor
TF locus tag: Tmel_0089
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Thermotogales
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 50 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -55
Score: 6.3
Sequence: TTATCAGTCTATATATGTGACTGATAA
Locus tag: Tmel_0413
Name: clpA
Funciton: Chaperone protein
clpA
Chaperone protein

Position: -54
Score: 5.8
Sequence: TTAGCAGTCGATGATTAAGAGTGACAA
Locus tag: Tmel_0053
Name: groS
Funciton: GroES chaperonin
Locus tag: Tmel_0052
Name: groL
Funciton: GroEL chaperonin
groS
GroES chaperonin
groL
GroEL chaperonin

Position: -51
Score: 6.1
Sequence: TTATCAGACATAGCATAAGAGTGATAA
Locus tag: Tmel_0089
Name: hrcA
Funciton: Heat shock response regulator, HrcA family
Locus tag: Tmel_0088
Name: grpE
Funciton: Heat shock protein
Locus tag: Tmel_0087
Name: dnaJ
Funciton: Chaperone Hsp40
hrcA
Heat shock response regulator, HrcA family
grpE
Heat shock protein
dnaJ
Chaperone Hsp40

Position: -157
Score: 5.6
Sequence: ATAACAAACGAATGTTACGATTGCTAT
Position: -57
Score: 6.5
Sequence: TTATCACTCTTGACAATAGAGTGATAA
Locus tag: Tmel_1128
Name: dnaK
Funciton: Chaperone Hsp70
Locus tag: Tmel_1127
Name: hsp20
Funciton: Chaperone Hsp20
dnaK
Chaperone Hsp70
hsp20
Chaperone Hsp20
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
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