Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HrcA in Thermotoga petrophila RKU-1

Properties
Regulator type: Transcription factor
TF locus tag: Tpet_0076
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Thermotogales
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 50 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -51
Score: 6.6
Sequence: TTATCAAACGTAATATTTGAGTGCTAA
Locus tag: Tpet_0054
Name: clpA
Funciton: Chaperone protein
clpA
Chaperone protein

Position: -49
Score: 6.4
Sequence: TTATCAAACGAAAAAAATGATTGCTAA
Locus tag: Tpet_0547
Name: TM0370
Funciton: Predicted RecA-like ATPase, COG0467
Locus tag: Tpet_0548
Name: TM0369
Funciton: Conserved hypothetical protein
TM0370
Predicted RecA-like ATPase, COG0467
TM0369
Conserved hypothetical protein

Position: -179
Score: 5.9
Sequence: TTATCATTCAAAAGTTTCATTTGCTAT
Locus tag: Tpet_0544
Name: dnaK
Funciton: Chaperone Hsp70
Locus tag: Tpet_0543
Name: hsp20
Funciton: Chaperone Hsp20
dnaK
Chaperone Hsp70
hsp20
Chaperone Hsp20

Position: -30
Score: 6.5
Sequence: TTAGCACTCAAAAGAAGGGAGTGCTAA
Locus tag: Tpet_0076
Name: hrcA
Funciton: Heat shock response regulator, HrcA family
Locus tag: Tpet_0077
Name: grpE
Funciton: Heat shock protein
Locus tag: Tpet_0078
Name: dnaJ
Funciton: Chaperone Hsp40
hrcA
Heat shock response regulator, HrcA family
grpE
Heat shock protein
dnaJ
Chaperone Hsp40

Position: -48
Score: 6.4
Sequence: TTAGCAGTCGAACGATGAGAGTGCTAA
Locus tag: Tpet_0416
Name: groS
Funciton: GroES chaperonin
Locus tag: Tpet_0415
Name: groL
Funciton: GroEL chaperonin
groS
GroES chaperonin
groL
GroEL chaperonin
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD