Regulon of HrcA in Thermotoga sp. RQ2
| Regulator type: | Transcription factor |
| TF locus tag: | TRQ2_0076 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Thermotogales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -30
Score: 6.5 Sequence: TTAGCACTCAAAAGAAGGGAGTGCTAA
Locus tag: TRQ2_0076
Name: hrcA Funciton: Heat shock response regulator, HrcA family
Locus tag: TRQ2_0077
Name: grpE Funciton: Heat shock protein
Locus tag: TRQ2_0078
Name: dnaJ Funciton: Chaperone Hsp40 |
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hrcA
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Heat shock response regulator, HrcA family
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grpE
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Heat shock protein
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dnaJ
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Chaperone Hsp40
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Position: -179
Score: 5.9 Sequence: TTATCATTCAAAAGTTTCATTTGCTAT
Locus tag: TRQ2_0558
Name: dnaK Funciton: Chaperone Hsp70
Locus tag: TRQ2_0557
Name: hsp20 Funciton: Chaperone Hsp20 |
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dnaK
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Chaperone Hsp70
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hsp20
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Chaperone Hsp20
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Position: -51
Score: 6.3 Sequence: TTATCAAACGTAAGATTTAAGTGCTAA
Locus tag: TRQ2_0054
Name: clpA Funciton: Chaperone protein |
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clpA
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Chaperone protein
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Position: -48
Score: 6.4 Sequence: TTAGCAGTCGAACGATGAGAGTGCTAA
Locus tag: TRQ2_0431
Name: groS Funciton: GroES chaperonin
Locus tag: TRQ2_0430
Name: groL Funciton: GroEL chaperonin |
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groS
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GroES chaperonin
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groL
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GroEL chaperonin
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |