Regulon of AraR in Thermotoga maritima MSB8
| Regulator type: | Transcription factor |
| TF locus tag: | TM0275 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraR - Thermotogales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By trascription factor - AraR
- By TF family - GntR/Others
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -1498
Score: 6.3 Sequence: ATAAAaGTACGTACCaTTAT
Position: -1396
Score: 4.7 Sequence: ccAtcGGTACGTACCgTTAT
Locus tag: TM0278
Name: araF Funciton: Predicted arabinosides or arabinose ABC transport system, permease protein 1
Locus tag: TM0279
Name: araG Funciton: Predicted arabinosides or arabinose ABC transport system, permease protein 2 |
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araF
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Predicted arabinosides or arabinose ABC transport system, permease protein 1
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araG
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Predicted arabinosides or arabinose ABC transport system, permease protein 2
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Position: -44
Score: 5.9 Sequence: AATAATGTACGTACCTAAAT
Locus tag: TM0280
Name: glsA Funciton: Putative glycosyl hydrolase of unknown function (DUF1680)
Locus tag: TM0281
Name: abfA Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: TM0282
Name: araM Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: TM0283
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: TM0284
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: TM0285
Name: araW Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon |
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glsA
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Putative glycosyl hydrolase of unknown function (DUF1680)
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abfA
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Alpha-N-arabinofuranosidase (EC 3.2.1.55)
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araM
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L-arabinose-specific 1-epimerase (mutarotase)
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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araB
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Ribulokinase (EC 2.7.1.16)
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araW
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Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
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Position: -164
Score: 4.7 Sequence: ATAACGGTACGTACCGATGG
Position: -62
Score: 6.3 Sequence: ATAATGGTACGTACTTTTAT
Locus tag: TM0276
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |