Regulon of RbkR in Methanosarcina barkeri str. fusaro
| Regulator type: | Transcription factor |
| TF locus tag: | Mbar_A1523 |
| Regulator family: | [Other] |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Regulog: | RbkR - Methanosarcinales |
| Statistics of regulated genes: | |
| - Genes | 2 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Methanosarcinales
- By trascription factor - RbkR
- By TF family - [Other]
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -46
Score: 5.7 Sequence: CATCTCAGAATTGAGATG
Position: -28
Score: 5.5 Sequence: CATCTCAAAATTAAGATA
Locus tag: Mbar_A1523
Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: Mbar_A1524
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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rbkR
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DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
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ribB
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3,4-dihydroxy-2-butanone 4-phosphate synthase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |