Regulon of RbkR in Pyrococcus furiosus DSM 3638

Properties
Regulator type:	Transcription factor
TF locus tag:	PF0988
Regulator family:	[Other]
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Regulog:	RbkR - Thermococcales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Thermococcales
By trascription factor - RbkR
By TF family - [Other]
By effector - Flavin mononucleotide
By pathway - Riboflavin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -56 Score: 4.9 Sequence: CTGTCTTATTTTTGGAACAC Position: -23 Score: 4.6 Sequence: TAGTTCTATACTTGAGACAT Locus tag: PF0064 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: PF0063 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) Locus tag: PF0062 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: PF0061 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
	PF0064	ribBA	3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
	PF0063	ribH	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
	PF0062	ribD	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
	PF0061	ribE	Riboflavin synthase alpha chain (EC 2.5.1.9)
Position: 133 Score: 6.1 Sequence: TTGTTCTGAAAATGGAACAA Locus tag: PF0163 Name: ribU Funciton: Substrate-specific component RibU of riboflavin ECF transporter
	PF0163	ribU	Substrate-specific component RibU of riboflavin ECF transporter

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD