Profile of regulator RbkR in Thermococcales
Properties
| Regulator family: |
[Other] |
| Regulation mode: |
|
| Biological process: |
Riboflavin biosynthesis |
| Effector: |
Flavin mononucleotide |
| Regulog: |
RbkR - Thermococcales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pyrococcus abyssi GE5
|
|
PAB2198 |
ribU |
-62 |
5.5 |
TCGTTCAAAATTTGGAACAT |
|
Pyrococcus furiosus DSM 3638
|
|
PF0163 |
ribU |
133 |
6.1 |
TTGTTCTGAAAATGGAACAA |
|
PF0064 |
ribBA |
-23 |
4.6 |
TAGTTCTATACTTGAGACAT |
|
PF0064 |
ribBA |
-56 |
4.9 |
CTGTCTTATTTTTGGAACAC |
|
Pyrococcus horikoshii OT3
|
|
PH0251 |
ribU |
-62 |
6.2 |
TTGTTCCAATTATAGAACAT |
|
Thermococcus gammatolerans EJ3
|
|
TGAM_1254 |
ribD |
92 |
6 |
ATGTTCCAAAAACGGAACAA |
|
Thermococcus kodakaraensis KOD1
|
|
TK2194 |
ribU |
-62 |
6.1 |
TTGTTCTATGTATGGAACAA |
|
TK0424 |
ribD |
-52 |
6 |
TTGTTCCAACCTTGGAACAA |
|
TK0428 |
ribBA |
-62 |
5.8 |
TGATTCCATTTTTGGAACAA |
|
TK0428 |
ribBA |
-40 |
4.6 |
TTTTTAAAAATTTAGAACAT |
|
Thermococcus onnurineus NA1
|
|
TON_0610 |
ribD |
-53 |
6.3 |
TTATTCCAATTTTGGAACAA |
|
TON_1440 |
ribU |
-62 |
5.6 |
GTGTTTCATATTGGGAACAA |
|
Thermococcus sibiricus MM 739
|
|
TSIB_0195 |
ribU |
-61 |
6 |
ATATTCCAATTATGGAACAA |
Export
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