Regulon of RbkR in Pyrobaculum calidifontis JCM 11548

Properties
Regulator type:	Transcription factor
TF locus tag:	Pcal_1071
Regulator family:	[Other]
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Regulog:	RbkR - Thermoproteales
Statistics of regulated genes:
- Genes	4
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 23 sites [see more]

Member of regulog collections

By taxonomy - Thermoproteales
By trascription factor - RbkR
By TF family - [Other]
By effector - Flavin mononucleotide
By pathway - Riboflavin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -51 Score: 6.1 Sequence: TGTAAAAAATAGTTTACA Position: -19 Score: 3.9 Sequence: CCTCACCTAGAGTTGACA Locus tag: Pcal_1121 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
	Pcal_1121	ribB	3,4-dihydroxy-2-butanone 4-phosphate synthase
Position: -50 Score: 4.2 Sequence: TGTAAACTCTTGGAGACT Locus tag: Pcal_1124 Name: arfB Funciton: Formamide hydrolase
	Pcal_1124	arfB	Formamide hydrolase
Position: -54 Score: 4.2 Sequence: AGTCTCCAAGAGTTTACA Locus tag: Pcal_1123 Name: arfA Funciton: GTP cyclohydrolase III (EC 3.5.4.29) Locus tag: Pcal_1122 Name: arfC Funciton: 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase
	Pcal_1123	arfA	GTP cyclohydrolase III (EC 3.5.4.29)
	Pcal_1122	arfC	2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD