Profile of regulator RbkR in Thermoproteales
Properties
| Regulator family: |
[Other] |
| Regulation mode: |
|
| Biological process: |
Riboflavin biosynthesis |
| Effector: |
Flavin mononucleotide |
| Regulog: |
RbkR - Thermoproteales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pyrobaculum aerophilum str. IM2
|
|
PAE2986 |
ribB |
-18 |
4.4 |
TAGAAAATTAAGTTTACC |
|
PAE2983 |
arfB |
-82 |
3.7 |
AGTCAACAACAGTGTGTA |
|
PAE2986 |
ribB |
-51 |
4.3 |
AGTGTAAAAAAGTTGACA |
|
PAE2983 |
arfB |
-49 |
5.5 |
TGTAAACATCAGTTGACT |
|
PAE2984 |
arfA |
-22 |
3.7 |
TACACACTGTTGTTGACT |
|
PAE2984 |
arfA |
-55 |
5.5 |
AGTCAACTGATGTTTACA |
|
Pyrobaculum arsenaticum DSM 13514
|
|
Pars_1353 |
ribB |
-36 |
3.7 |
AGAAAAAAAGAGTTAACC |
|
Pars_1353 |
ribB |
-68 |
5.5 |
TGTAAAAATCAGTTGACA |
|
Pars_1350 |
arfB |
-81 |
5.6 |
TGTAAACAAAAGTTACCA |
|
Pars_1351 |
arfA |
-56 |
5.6 |
TGGTAACTTTTGTTTACA |
|
Pars_1351 |
arfA |
-23 |
3.7 |
TATAGCGAGTTGTTTACA |
|
Pyrobaculum calidifontis JCM 11548
|
|
Pcal_1123 |
arfA |
-54 |
4.2 |
AGTCTCCAAGAGTTTACA |
|
Pcal_1124 |
arfB |
-50 |
4.2 |
TGTAAACTCTTGGAGACT |
|
Pcal_1121 |
ribB |
-51 |
6.1 |
TGTAAAAAATAGTTTACA |
|
Pcal_1121 |
ribB |
-19 |
3.9 |
CCTCACCTAGAGTTGACA |
|
Pyrobaculum islandicum DSM 4184
|
|
Pisl_0384 |
arfA |
-56 |
5.9 |
CGTAAACTAAAGTTTACA |
|
Pisl_0383 |
arfB |
-50 |
5.9 |
TGTAAACTTTAGTTTACG |
|
Pisl_0386 |
ribB |
-51 |
6.3 |
TGTAAACATTAGTTTACA |
|
Thermoproteus neutrophilus V24Sta
|
|
Tneu_1743 |
arfA |
-56 |
6.1 |
TGTAAACAGAAGTTTACA |
|
Tneu_1744 |
arfB |
-84 |
4.3 |
TGTAAACCTTAGTAGATA |
|
Tneu_1744 |
arfB |
-51 |
6.1 |
TGTAAACTTCTGTTTACA |
|
Tneu_1741 |
ribB |
-32 |
6.4 |
TGTAAACAATAGTTTACA |
|
Tneu_1743 |
arfA |
-23 |
4.3 |
TATCTACTAAGGTTTACA |
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