Regulon of RbkR in Metallosphaera sedula DSM 5348

Properties
Regulator type:	Transcription factor
TF locus tag:	Msed_1737
Regulator family:	[Other]
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Regulog:	RbkR - Sulfolobales
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Sulfolobales
By trascription factor - RbkR
By TF family - [Other]
By effector - Flavin mononucleotide
By pathway - Riboflavin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -47 Score: 4.3 Sequence: AGGAGTAGATACTAAA Position: -20 Score: 4.7 Sequence: TTTGGTATTTACCAAT Locus tag: Msed_0426 Name: ribT Funciton: Predicted riboflavin transporter ribT
	Msed_0426	ribT	Predicted riboflavin transporter ribT
Position: -42 Score: 5.2 Sequence: ATTAGTATATACGCTT Locus tag: Msed_0046 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase Locus tag: Msed_0047 Name: ribE Funciton: Riboflavin synthase archaeal (EC 2.5.1.9) Locus tag: Msed_0048 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) Locus tag: Msed_0049 Name: arfA Funciton: GTP cyclohydrolase III (EC 3.5.4.29) Locus tag: Msed_0050 Name: pyrD Funciton: Pyrimidine deaminase archaeal predicted (EC 3.5.4.26)
	Msed_0046	ribB	3,4-dihydroxy-2-butanone 4-phosphate synthase
	Msed_0047	ribE	Riboflavin synthase archaeal (EC 2.5.1.9)
	Msed_0048	ribH	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
	Msed_0049	arfA	GTP cyclohydrolase III (EC 3.5.4.29)
	Msed_0050	pyrD	Pyrimidine deaminase archaeal predicted (EC 3.5.4.26)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD