Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HypR2 in Roseovarius nubinhibens ISM

Properties
Regulator type: Transcription factor
TF locus tag: ISM_08245
Regulator family: GntR/Others
Regulation mode:
Biological process: Proline and 4-hydrohyproline utilization
Effector: 4-hydroxyproline
Regulog: HypR2 - Rhodobacterales
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -59
Score: 5.2
Sequence: TTTTGGATACATTA
Locus tag: ISM_08240
Name: hypH
Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
hypH
Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible

Position: -13
Score: 5.2
Sequence: TAATGTATCCAAAA
Locus tag: ISM_08245
Name: hypR2
Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
hypR2
Predicted regulator for proline and hydrohyproline utilization, GntR family

Position: -165
Score: 5.2
Sequence: TTTTGTATCCATTA
Locus tag: ISM_08255
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: ISM_08250
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
hypD
1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
hypY
Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
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