Regulon of HypR2 in Roseovarius nubinhibens ISM

Properties
Regulator type:	Transcription factor
TF locus tag:	ISM_08245
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	4-hydroxyproline
Regulog:	HypR2 - Rhodobacterales
Statistics of regulated genes:
- Genes	4
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By trascription factor - HypR
By TF family - GntR/Others
By effector - 4-hydroxyproline
By pathway - Proline and 4-hydrohyproline utilization

Regulated operons
	Locus Tag	Name	Function
Position: -59 Score: 5.2 Sequence: TTTTGGATACATTA Locus tag: ISM_08240 Name: hypH Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
	ISM_08240	hypH	Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
Position: -13 Score: 5.2 Sequence: TAATGTATCCAAAA Locus tag: ISM_08245 Name: hypR2 Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
	ISM_08245	hypR2	Predicted regulator for proline and hydrohyproline utilization, GntR family
Position: -165 Score: 5.2 Sequence: TTTTGTATCCATTA Locus tag: ISM_08255 Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted Locus tag: ISM_08250 Name: hypY Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
	ISM_08255	hypD	1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
	ISM_08250	hypY	Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)

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