Profile of regulator HypR2 in Rhodobacterales
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Proline and 4-hydrohyproline utilization |
| Effector: | 4-hydroxyproline |
| Regulog: | HypR2 - Rhodobacterales |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - HypR
- By TF family - GntR/Others
- By effector - 4-hydroxyproline
- By pathway - Proline and 4-hydrohyproline utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Paracoccus denitrificans PD1222 | |||||
| Pden_1183 | hypR2 | -178 | 4.3 | TTTCGTATACTATA | |
| Pden_1184 | hypY | -50 | 4.3 | TATAGTATACGAAA | |
| Roseobacter sp. MED193 | |||||
| MED193_09635 | hypR2 | -86 | 4.6 | TATTGGATCCAATT | |
| MED193_08463 | hypY | -39 | 4.5 | GATTGGATACAATA | |
| MED193_09625 | hypD | -151 | 4.6 | AATTGGATCCAATA | |
| Roseovarius nubinhibens ISM | |||||
| ISM_08240 | hypH | -59 | 5.2 | TTTTGGATACATTA | |
| ISM_08255 | hypD | -165 | 5.2 | TTTTGTATCCATTA | |
| ISM_08245 | hypR2 | -13 | 5.2 | TAATGTATCCAAAA | |
| Silicibacter TM1040 | |||||
| TM1040_3324 | hypR2 | -129 | 4.3 | TATCGGATACATCA | |
| TM1040_3323 | hypS | -127 | 4.8 | TTTTGGATACGTTA | |
| TM1040_3323 | hypS | -41 | 4.3 | TGATGTATCCGATA | |
| TM1040_3198 | hypD | -158 | 5.3 | TTTTGGATACAAAA | |
| TM1040_3324 | hypR2 | -43 | 4.8 | TAACGTATCCAAAA | |
| TM1040_3325 | hypH | -55 | 4.8 | ATATGTATACATTA | |
| Silicibacter pomeroyi DSS-3 | |||||
| SPOA0261 | hypR2 | -38 | 4.1 | ATCTGTATCCGAAA | |
| SPOA0267 | hypD | -172 | 5 | TTCTGTATCCAAAA | |
| SPOA0260 | hypH | -64 | 5.2 | TTTTGGATACATTA | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |