Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhrR in Pseudomonas stutzeri A1501

Properties
Regulator type: Transcription factor
TF locus tag: PST_1965
Regulator family: MerR
Regulation mode: repressor
Biological process: Light-dependent DNA repair
Effector: Blue light; Adenosylcobalamin
Regulog: PhrR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 13
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -85
Score: 5.2
Sequence: TGTACATTCGAATAACCATGTATA
Locus tag: PST_1967
Name: COG1090
Funciton: Predicted nucleoside-diphosphate sugar epimerase
Locus tag: PST_1968
Name: hemH
Funciton: Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
COG1090
Predicted nucleoside-diphosphate sugar epimerase
hemH
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)

Position: -57
Score: 5.2
Sequence: TGTACAGGATTATTGTTTTGTTCA
Locus tag: PST_0951
Name: PF04134
Funciton: Putative thiol-disulphide oxidoreductase DCC
Locus tag: PST_0952
Name: phrB
Funciton: DNA photolyase PhrB
PF04134
Putative thiol-disulphide oxidoreductase DCC
phrB
DNA photolyase PhrB

Position: -217
Score: 5.3
Sequence: TATACATGGTTATTCGAATGTACA
Locus tag: PST_1966
Name: COG3272
Funciton: COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA
Locus tag: PST_1965
Name: phrR
Funciton: Transcriptional regulator, MerR family, associated with photolyase
Locus tag: PST_1964
Name: phr
Funciton: Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
Locus tag: PST_1963
Name: PF07366
Funciton: Protein of unknown function DUF1486
Locus tag: PST_1962
Name: PF00106
Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
Locus tag: PST_1961
Name: PF01593
Funciton: Flavin containing amine oxidoreductase
Locus tag: PST_1960
Name: PF07103
Funciton: Protein of unknown function DUF1365
Locus tag: PST_1959
Name: PF02353
Funciton: S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase
Locus tag: PST_1958
Name: mcp4
Funciton: methyl-accepting chemotaxis protein
COG3272
COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA
phrR
Transcriptional regulator, MerR family, associated with photolyase
phr
Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
PF07366
Protein of unknown function DUF1486
PF00106
Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
PF01593
Flavin containing amine oxidoreductase
PF07103
Protein of unknown function DUF1365
PF02353
S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase
mcp4
methyl-accepting chemotaxis protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD