Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhrR in Pseudomonas entomophila L48

Properties
Regulator type: Transcription factor
TF locus tag: PSEEN0882
Regulator family: MerR
Regulation mode: repressor
Biological process: Light-dependent DNA repair
Effector: Blue light; Adenosylcobalamin
Regulog: PhrR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 17
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -74
Score: 5.9
Sequence: TATACAAACATTGTGCATTGTACA
Locus tag: PSEEN0884
Name: COG3380
Funciton: Predicted NAD/FAD-dependent oxidoreductase
PSEEN0884
COG3380
Predicted NAD/FAD-dependent oxidoreductase
Position: -137
Score: 5.5
Sequence: TGTACAATGCACAATGTTTGTATA
Locus tag: PSEEN0885
Name: COG1090
Funciton: Predicted nucleoside-diphosphate sugar epimerase
Locus tag: PSEEN0886
Name: hemH
Funciton: Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
PSEEN0885
COG1090
Predicted nucleoside-diphosphate sugar epimerase
PSEEN0886
hemH
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
Position: -49
Score: 6.3
Sequence: TGTACAAGAACCTAGTCTTGTACA
Locus tag: PSEEN2737
Name: PSEEN2737
Funciton: FIG026291: Hypothetical periplasmic protein
Locus tag: PSEEN2738
Name: PF12915
Funciton: Protein of unknown function (DUF3833)
Locus tag: PSEEN2739
Name: phrB
Funciton: DNA photolyase PhrB
Locus tag: PSEEN2740
Name: null
Funciton: hypothetical protein
PSEEN2737
PSEEN2737
FIG026291: Hypothetical periplasmic protein
PSEEN2738
PF12915
Protein of unknown function (DUF3833)
PSEEN2739
phrB
DNA photolyase PhrB
PSEEN2740
hypothetical protein
Position: -93
Score: 5.6
Sequence: TATACAGAAAGTAACACTTGTATA
Position: -43
Score: 5
Sequence: TGTACAAACCAAGCCTTCTGTACA
Locus tag: PSEEN0883
Name: COG3272
Funciton: COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA
Locus tag: PSEEN0882
Name: phrR
Funciton: Transcriptional regulator, MerR family, associated with photolyase
Locus tag: PSEEN0881
Name: phr
Funciton: Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
Locus tag: PSEEN0880
Name: PF00106
Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
PSEEN0883
COG3272
COG1683: Uncharacterized conserved protein / COG3272: Hypothetical protein YbgA
PSEEN0882
phrR
Transcriptional regulator, MerR family, associated with photolyase
PSEEN0881
phr
Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
PSEEN0880
PF00106
Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
Position: -94
Score: 6.1
Sequence: TGTACAAGACTATTGACCTGTACA
Position: -43
Score: 4.6
Sequence: TGTACAAAATCACCTCGCTGTACA
Locus tag: PSEEN2706
Name: PF07366
Funciton: Protein of unknown function DUF1486
Locus tag: PSEEN2705
Name: PF00106
Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
Locus tag: PSEEN2704
Name: PF01593
Funciton: Flavin containing amine oxidoreductase
Locus tag: PSEEN2703
Name: PF07103
Funciton: Protein of unknown function DUF1365
Locus tag: PSEEN2702
Name: PF02353
Funciton: S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase
Locus tag: PSEEN2701
Name: PF11086
Funciton: Protein of unknown function DUF2878
PSEEN2706
PF07366
Protein of unknown function DUF1486
PSEEN2705
PF00106
Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
PSEEN2704
PF01593
Flavin containing amine oxidoreductase
PSEEN2703
PF07103
Protein of unknown function DUF1365
PSEEN2702
PF02353
S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase
PSEEN2701
PF11086
Protein of unknown function DUF2878
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