Regulon of NrdR in Ruminococcus gnavus ATCC 29149

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMGNA_00802
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Regulog:	NrdR - Clostridia-3
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By trascription factor - NrdR
By TF family - NrdR
By effector - Deoxyribonucleotides
By pathway - Deoxyribonucleotide biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -153 Score: 5.6 Sequence: ACACTATATGTAGTAT Position: -123 Score: 5 Sequence: ACACTATATATCGTTT Position: -92 Score: 4.8 Sequence: TTACTATATATAGAGG Locus tag: RUMGNA_01429 Name: ligA Funciton: NAD-dependent DNA ligase
	RUMGNA_01429	ligA	NAD-dependent DNA ligase
Position: -78 Score: 4.8 Sequence: ATCCAATATCTTGTGT Position: -48 Score: 5.3 Sequence: CCACTATATTTTGTAT Locus tag: RUMGNA_02624 Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Locus tag: RUMGNA_02625 Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
	RUMGNA_02624	nrdE	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
	RUMGNA_02625	nrdF	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Position: -91 Score: 4 Sequence: ATACTAGATGTTGGTG Position: -44 Score: 4.3 Sequence: ACACTAAATACAGCGT Locus tag: RUMGNA_02734 Name: nrdD2 Funciton: Oxygen-sensitive ribonucleoside-triphosphate reductase (EC 1.17.4.2) Locus tag: RUMGNA_02735 Name: COG0492 Funciton: thioredoxin reductase
	RUMGNA_02734	nrdD2	Oxygen-sensitive ribonucleoside-triphosphate reductase (EC 1.17.4.2)
	RUMGNA_02735	COG0492	thioredoxin reductase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD