Profile of regulator NrdR in Clostridia-3
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Clostridia-3 |
Member of regulog collections
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bacteroides pectinophilus ATCC 43243 | |||||
| BACPEC_00926 | nrdD | -147 | 5.1 | GCACAATATATTGTTT | |
| BACPEC_00926 | nrdD | -116 | 3.9 | TTTCTATATTTGGTAG | |
| BACPEC_00140 | nrdD | -159 | 4.1 | ACGCAATATTTGGTAA | |
| BACPEC_00140 | nrdD | -128 | 4.5 | TATCTATATATTGTGG | |
| Blautia hansenii DSM 20583 | |||||
| BLAHAN_01704 | nrdE | -41 | 5.4 | ATACAAGATATAGTAT | |
| BLAHAN_00802 | ligA | -123 | 5 | ACACTATATATCGTTT | |
| BLAHAN_00802 | ligA | -153 | 5.6 | ACACTATATGTAGTAT | |
| BLAHAN_00802 | ligA | -92 | 4.8 | TTACTATATATAGAGG | |
| Bryantella formatexigens DSM 14469 | |||||
| BRYFOR_03555 | nrdD2 | -110 | 4.8 | ACACTATATATTGATG | |
| BRYFOR_03555 | nrdD2 | -142 | 4.4 | ATACTCTATTTAGTAC | |
| Clostridiales bacterium 1_7_47_FAA | |||||
| Cbac1_010100006828 | nrdD | -141 | 4.8 | ACACAACATTTAGTGC | |
| Cbac1_010100017114 | nrdD2 | -144 | 5 | ACACAATATCTAGTTT | |
| Cbac1_010100006828 | nrdD | -173 | 3.8 | ATACATCCTATCGTAT | |
| Cbac1_010100017114 | nrdD2 | -127 | 4.1 | ACACAAAATGTTATAC | |
| Clostridium bolteae ATCC BAA-613 | |||||
| CLOBOL_02823 | nrdD | -171 | 4 | ATACATCTTATCGTAT | |
| CLOBOL_02823 | nrdD | -140 | 5 | ACACAACATTTAGTGG | |
| Clostridium nexile DSM 1787 | |||||
| CLONEX_03145 | nrdE | -60 | 5.1 | CAACTATATATTGTGG | |
| CLONEX_03145 | nrdE | -28 | 5 | ATACTATAAATAGTAA | |
| CLONEX_02838 | nrdD2 | -122 | 4.3 | TAACAATATATAGGAA | |
| CLONEX_02838 | nrdD2 | -91 | 4.9 | ACACAATATATGGTTT | |
| Clostridium scindens ATCC 35704 | |||||
| CLOSCI_01031 | nrdD | -67 | 4.6 | GTGCTAGATATTGTAT | |
| CLOSCI_01031 | nrdD | -35 | 4.1 | AACCAACATTTAGTGG | |
| CLOSCI_01639 | nrdD2 | -96 | 4.4 | ACACAATAAGTGGTAT | |
| CLOSCI_01639 | nrdD2 | -129 | 4.8 | GCACAATATATTGTTA | |
| CLOSCI_02889 | nrdE | -64 | 5.1 | CAACAATATATTGTGG | |
| CLOSCI_02889 | nrdE | -33 | 4.4 | AATCAATAAATTGTAT | |
| CLOSCI_01031 | nrdD | -135 | 4.4 | AAAGTAAATATTGTAT | |
| CLOSCI_01639 | nrdD2 | -160 | 4.8 | TAACAATATATTGTGC | |
| Dorea formicigenerans ATCC 27755 | |||||
| DORFOR_02443 | nrdD | -162 | 4.2 | ACGCCATATTTTGTAG | |
| DORFOR_02443 | nrdD | -129 | 5 | ACACAATATCTTGTGA | |
| DORFOR_02443 | nrdD | -64 | 4.9 | ACACAAGATGTTGTGG | |
| Dorea longicatena DSM 13814 | |||||
| DORLON_00953 | nrdD | -102 | 4.6 | GCACAATATCTTGTGC | |
| DORLON_00953 | nrdD | -70 | 5 | AAACAATATTTAGTAG | |
| DORLON_01167 | COG0345 | -74 | 3.8 | ACATAACAGATTGTTT | |
| Eubacterium eligens ATCC 27750 | |||||
| EUBELI_01571 | nrdD | -178 | 5.1 | TTACAAGATATTGTGT | |
| EUBELI_01571 | nrdD | -146 | 4.6 | AGCCTATATGTTGTAT | |
| Eubacterium rectale ATCC 33656 | |||||
| EUBREC_2400 | nrdD | -284 | 4.7 | CTACAAAATATTGTTG | |
| EUBREC_2400 | nrdD | -253 | 4.9 | CAACAATATCTTGTAT | |
| EUBREC_2400 | nrdD | -26 | 5.5 | ATACTATATATAGTAC | |
| Roseburia intestinalis L1-82 | |||||
| ROSINTL182_03097 | nrdD | -95 | 5.9 | ACACAATATATTGTAT | |
| Ruminococcus gnavus ATCC 29149 | |||||
| RUMGNA_02624 | nrdE | -78 | 4.8 | ATCCAATATCTTGTGT | |
| RUMGNA_02624 | nrdE | -48 | 5.3 | CCACTATATTTTGTAT | |
| RUMGNA_01429 | ligA | -153 | 5.6 | ACACTATATGTAGTAT | |
| RUMGNA_01429 | ligA | -123 | 5 | ACACTATATATCGTTT | |
| RUMGNA_01429 | ligA | -92 | 4.8 | TTACTATATATAGAGG | |
| RUMGNA_02734 | nrdD2 | -91 | 4 | ATACTAGATGTTGGTG | |
| RUMGNA_02734 | nrdD2 | -44 | 4.3 | ACACTAAATACAGCGT | |
| Ruminococcus lactaris ATCC 29176 | |||||
| RUMLAC_00868 | nrdD | 19 | 5.5 | ATACTATATTTTGTAT | |
| RUMLAC_00868 | nrdD | 48 | 4.1 | AGACAATATCTTGAAA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |