Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Rhodococcus sp. RHA1

Properties
Regulator type: Transcription factor
TF locus tag: RHA1_ro02054
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Nocardiaceae
Statistics of regulated genes:
- Genes 35
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 22 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -95
Score: 5.2
Sequence: TTGTGACTGTTGTCACAG
Locus tag: RHA1_ro02071
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC: 6.2.1.3 )
Locus tag: RHA1_ro02070
Name: gpm
Funciton: Phosphoglycerate mutase (EC 5.4.2.1)
RHA1_ro02071
fadD
Long-chain-fatty-acid--CoA ligase (EC: 6.2.1.3 )
RHA1_ro02070
gpm
Phosphoglycerate mutase (EC 5.4.2.1)
Position: -40
Score: 5.4
Sequence: TTGTGACAGCCATCACAA
Locus tag: RHA1_ro02831
Name: dhaS
Funciton: Acetaldehyde dehydrogenase (EC 1.2.1.10)
Locus tag: RHA1_ro02832
Name: adhB
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
RHA1_ro02831
dhaS
Acetaldehyde dehydrogenase (EC 1.2.1.10)
RHA1_ro02832
adhB
Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
Position: -71
Score: 5.9
Sequence: TTGTGGCAGCTGTCACAA
Locus tag: RHA1_ro06201
Name: choD
Funciton: Cholesterol oxidase (EC 1.1.3.6)
RHA1_ro06201
choD
Cholesterol oxidase (EC 1.1.3.6)
Position: -17
Score: 4.4
Sequence: TTGTGAGGTAGGTCACAA
Locus tag: RHA1_ro05230
Name: coxM
Funciton: Carbon monoxide dehydrogenase medium chain (EC 1.2.99.2)
Locus tag: RHA1_ro05231
Name: coxS
Funciton: Carbon monoxide dehydrogenase small chain (EC 1.2.99.2)
Locus tag: RHA1_ro05232
Name: coxL
Funciton: Carbon monoxide dehydrogenase form I, large chain( EC:1.2.99.2 )
Locus tag: RHA1_ro05233
Name: coxF
Funciton: Carbon monoxide dehydrogenase F protein
Locus tag: RHA1_ro05234
Name: coxD
Funciton: Carbon monoxide dehydrogenase D protein
Locus tag: RHA1_ro05235
Name: coxG
Funciton: Carbon monoxide dehydrogenase G protein
Locus tag: RHA1_ro05236
Name: coxE
Funciton: Carbon monoxide dehydrogenase E protein
RHA1_ro05230
coxM
Carbon monoxide dehydrogenase medium chain (EC 1.2.99.2)
RHA1_ro05231
coxS
Carbon monoxide dehydrogenase small chain (EC 1.2.99.2)
RHA1_ro05232
coxL
Carbon monoxide dehydrogenase form I, large chain( EC:1.2.99.2 )
RHA1_ro05233
coxF
Carbon monoxide dehydrogenase F protein
RHA1_ro05234
coxD
Carbon monoxide dehydrogenase D protein
RHA1_ro05235
coxG
Carbon monoxide dehydrogenase G protein
RHA1_ro05236
coxE
Carbon monoxide dehydrogenase E protein
Position: -88
Score: 3.9
Sequence: CTGTGGCATAACTCACAA
Locus tag: RHA1_ro05909
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: RHA1_ro05910
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: RHA1_ro05911
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: RHA1_ro05912
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: RHA1_ro05913
Name: nuoE
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: RHA1_ro05914
Name: nuoF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: RHA1_ro05915
Name: nuoG
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: RHA1_ro05916
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: RHA1_ro05917
Name: nuoI
Funciton: NADH-quinone oxidoreductase chain I
Locus tag: RHA1_ro05918
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: RHA1_ro05919
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: RHA1_ro05920
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: RHA1_ro05921
Name: nuoM
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: RHA1_ro05922
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
RHA1_ro05909
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
RHA1_ro05910
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
RHA1_ro05911
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
RHA1_ro05912
nuoD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
RHA1_ro05913
nuoE
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
RHA1_ro05914
nuoF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
RHA1_ro05915
nuoG
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
RHA1_ro05916
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
RHA1_ro05917
nuoI
NADH-quinone oxidoreductase chain I
RHA1_ro05918
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
RHA1_ro05919
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
RHA1_ro05920
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
RHA1_ro05921
nuoM
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
RHA1_ro05922
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -215
Score: 4.9
Sequence: CTGTGACCGGGTTCACAA
Locus tag: RHA1_ro01583
Name: pntAa
Funciton: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
Locus tag: RHA1_ro01582
Name: pntAb
Funciton: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
Locus tag: RHA1_ro01581
Name: pntB
Funciton: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
RHA1_ro01583
pntAa
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
RHA1_ro01582
pntAb
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
RHA1_ro01581
pntB
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
Position: -103
Score: 6.3
Sequence: TCGTGAAAGCATTCACAA
Locus tag: RHA1_ro06345
Name: whiB
Funciton: WhiB-family transcriptional regulator involved in differentiation and sporulation
RHA1_ro06345
whiB
WhiB-family transcriptional regulator involved in differentiation and sporulation
Position: 22
Score: 5.8
Sequence: TTGTGCATGGGTTCACAA
Locus tag: RHA1_ro02054
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
Locus tag: RHA1_ro02053
Name: hemA
Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: RHA1_ro02052
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: RHA1_ro02051
Name: hemD
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: RHA1_ro02050
Name: hemB
Funciton: Porphobilinogen synthase (EC 4.2.1.24)
RHA1_ro02054
rex
Redox-sensitive transcriptional regulator Rex
RHA1_ro02053
hemA
Glutamyl-tRNA reductase (EC 1.2.1.70)
RHA1_ro02052
hemC
Porphobilinogen deaminase (EC 2.5.1.61)
RHA1_ro02051
hemD
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
RHA1_ro02050
hemB
Porphobilinogen synthase (EC 4.2.1.24)
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