Regulon of GguR in Ralstonia metallidurans CH34
| Regulator type: | Transcription factor |
| TF locus tag: | Rmet_0833 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | |
| Regulog: | GguR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - GguR
- By TF family - GntR/Others
- By pathway - Glucarate utilization
- By pathway - Galactarate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -109
Score: 4.6 Sequence: TGGTTGTACGATGACTT
Locus tag: Rmet_4736
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) |
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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Position: -98
Score: 4.5 Sequence: ATGTCATATGATGTCTT
Position: -91
Score: 4.4 Sequence: ATGATGTCTTACGACAA
Locus tag: Rmet_0832
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) |
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kgsD
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Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
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Position: -30
Score: 4.8 Sequence: CGGTCGTCGTATGACTT
Locus tag: Rmet_0833
Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family |
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gguR
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Predicted D-glucarate or D-galactorate utilization regulator, GntR family
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Position: -78
Score: 5.2 Sequence: AAGTCGTATGACGACAT
Locus tag: Rmet_4735
Name: gudP1 Funciton: D-glucarate permease
Locus tag: Rmet_4734
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) |
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gudP1
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D-glucarate permease
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garD
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D-galactarate dehydratase (EC 4.2.1.42)
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Position: -80
Score: 4.8 Sequence: AAGTCATACGACGACCG
Locus tag: Rmet_0834
Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: Rmet_0835
Name: tctC2 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates |
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gudD
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Glucarate dehydratase (EC 4.2.1.40)
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tctC2
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Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
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Position: -161
Score: 5.2 Sequence: AAGTCATCCGACGACTG
Position: -44
Score: 4.1 Sequence: TAGTTGTACGACATCCT
Locus tag: Rmet_0971
Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates |
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tctC1
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Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |