Regulon of Zur in Rhodococcus sp. RHA1
| Regulator type: | Transcription factor |
| TF locus tag: | RHA1_ro01222 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -8
Score: 5.7 Sequence: TAACGATAATGATTGTCGTAA
Locus tag: RHA1_ro02545
Name: znuC2 Funciton: Zinc ABC transporter, ATP-binding protein ZnuC |
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znuC2
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Zinc ABC transporter, ATP-binding protein ZnuC
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Position: -117
Score: 5.7 Sequence: TTTCGATAACGATTGTCATTA
Position: -63
Score: 5.8 Sequence: TGTCGAAAATGATTGTCATCA
Locus tag: RHA1_ro05617
Name: rpmB2 Funciton: LSU ribosomal protein L28p
Locus tag: RHA1_ro05616
Name: rpmG2 Funciton: LSU ribosomal protein L33p
Locus tag: RHA1_ro05615
Name: rpsN2 Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: RHA1_ro05614
Name: rpsR2 Funciton: SSU ribosomal protein S18p |
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rpmB2
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LSU ribosomal protein L28p
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rpmG2
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LSU ribosomal protein L33p
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rpsN2
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SSU ribosomal protein S14p (S29e)
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rpsR2
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SSU ribosomal protein S18p
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Position: -55
Score: 5 Sequence: CAACGGTAACGGTTTCCAATA
Locus tag: RHA1_ro04479
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: RHA1_ro04478
Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: RHA1_ro04477
Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
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znuA
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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znuC
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Zinc ABC transporter, ATP-binding protein ZnuC
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znuB
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Zinc ABC transporter, inner membrane permease protein ZnuB
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Position: -25
Score: 5.2 Sequence: TAATGAAAACAGTTATCATTT
Locus tag: RHA1_ro05533
Name: yciC3 Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family |
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yciC3
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Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
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Position: -47
Score: 4.7 Sequence: CTTTGACAACCGTTTGCAATA
Position: -31
Score: 5.7 Sequence: TTACGACAATCATTATCGTTA
Locus tag: RHA1_ro02546
Name: znuB2 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
Locus tag: RHA1_ro02547
Name: ROP_22710 Funciton: WD40/YVTN repeat-like-containing domain
Locus tag: RHA1_ro02548
Name: znuA2 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: RHA1_ro02549
Name: nfa23280 Funciton: WD40/YVTN repeat-like-containing domain |
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znuB2
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Zinc ABC transporter, inner membrane permease protein ZnuB
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ROP_22710
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WD40/YVTN repeat-like-containing domain
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znuA2
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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nfa23280
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WD40/YVTN repeat-like-containing domain
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Position: -83
Score: 5.8 Sequence: TGATGACAATCATTTTCGACA
Position: -29
Score: 5.7 Sequence: TAATGACAATCGTTATCGAAA
Locus tag: RHA1_ro05618
Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: RHA1_ro05619
Name: rpmE2 Funciton: LSU ribosomal protein L31p
Locus tag: RHA1_ro05620
Name: rpmF2 Funciton: LSU ribosomal protein L32p |
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yciC
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Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
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rpmE2
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LSU ribosomal protein L31p
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rpmF2
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LSU ribosomal protein L32p
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |