Regulon of Zur in Rhodococcus sp. RHA1

Properties
Regulator type:	Transcription factor
TF locus tag:	RHA1_ro01222
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Zinc homeostasis
Effector:	Zinc ion, (Zn2+)
Regulog:	Zur - Nocardiaceae
Statistics of regulated genes:
- Genes	16
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By taxonomy - Nocardiaceae
By trascription factor - Zur
By TF family - FUR
By effector - Zinc ion, (Zn2+)
By pathway - Zinc homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -8 Score: 5.7 Sequence: TAACGATAATGATTGTCGTAA Locus tag: RHA1_ro02545 Name: znuC2 Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
	RHA1_ro02545	znuC2	Zinc ABC transporter, ATP-binding protein ZnuC
Position: -117 Score: 5.7 Sequence: TTTCGATAACGATTGTCATTA Position: -63 Score: 5.8 Sequence: TGTCGAAAATGATTGTCATCA Locus tag: RHA1_ro05617 Name: rpmB2 Funciton: LSU ribosomal protein L28p Locus tag: RHA1_ro05616 Name: rpmG2 Funciton: LSU ribosomal protein L33p Locus tag: RHA1_ro05615 Name: rpsN2 Funciton: SSU ribosomal protein S14p (S29e) Locus tag: RHA1_ro05614 Name: rpsR2 Funciton: SSU ribosomal protein S18p
	RHA1_ro05617	rpmB2	LSU ribosomal protein L28p
	RHA1_ro05616	rpmG2	LSU ribosomal protein L33p
	RHA1_ro05615	rpsN2	SSU ribosomal protein S14p (S29e)
	RHA1_ro05614	rpsR2	SSU ribosomal protein S18p
Position: -55 Score: 5 Sequence: CAACGGTAACGGTTTCCAATA Locus tag: RHA1_ro04479 Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: RHA1_ro04478 Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC Locus tag: RHA1_ro04477 Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
	RHA1_ro04479	znuA	Zinc ABC transporter, periplasmic-binding protein ZnuA
	RHA1_ro04478	znuC	Zinc ABC transporter, ATP-binding protein ZnuC
	RHA1_ro04477	znuB	Zinc ABC transporter, inner membrane permease protein ZnuB
Position: -25 Score: 5.2 Sequence: TAATGAAAACAGTTATCATTT Locus tag: RHA1_ro05533 Name: yciC3 Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
	RHA1_ro05533	yciC3	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Position: -47 Score: 4.7 Sequence: CTTTGACAACCGTTTGCAATA Position: -31 Score: 5.7 Sequence: TTACGACAATCATTATCGTTA Locus tag: RHA1_ro02546 Name: znuB2 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB Locus tag: RHA1_ro02547 Name: ROP_22710 Funciton: WD40/YVTN repeat-like-containing domain Locus tag: RHA1_ro02548 Name: znuA2 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: RHA1_ro02549 Name: nfa23280 Funciton: WD40/YVTN repeat-like-containing domain
	RHA1_ro02546	znuB2	Zinc ABC transporter, inner membrane permease protein ZnuB
	RHA1_ro02547	ROP_22710	WD40/YVTN repeat-like-containing domain
	RHA1_ro02548	znuA2	Zinc ABC transporter, periplasmic-binding protein ZnuA
	RHA1_ro02549	nfa23280	WD40/YVTN repeat-like-containing domain
Position: -83 Score: 5.8 Sequence: TGATGACAATCATTTTCGACA Position: -29 Score: 5.7 Sequence: TAATGACAATCGTTATCGAAA Locus tag: RHA1_ro05618 Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family Locus tag: RHA1_ro05619 Name: rpmE2 Funciton: LSU ribosomal protein L31p Locus tag: RHA1_ro05620 Name: rpmF2 Funciton: LSU ribosomal protein L32p
	RHA1_ro05618	yciC	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
	RHA1_ro05619	rpmE2	LSU ribosomal protein L31p
	RHA1_ro05620	rpmF2	LSU ribosomal protein L32p

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Zur in Rhodococcus sp. RHA1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --