Regulon of CblR in Haloterrigena turkmenica DSM 5511
| Regulator type: | Transcription factor |
| TF locus tag: | |
| Regulator family: | |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | |
| Regulog: | CblR - Halobacteriales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Halobacteriales
- By trascription factor - CblR
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -37
Score: 5.3 Sequence: TTTACAACTATACTTGTTCT
Locus tag: Htur_5160
Name: cbtB Funciton: Cobalt transporter subunit CbtB, putative |
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cbtB
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Cobalt transporter subunit CbtB, putative
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Position: -45
Score: 4.6 Sequence: TCTGCAACCATAGTTGCGCT
Locus tag: Htur_1005
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Htur_1004
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Htur_1003
Name: cbiJ Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) |
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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cbiC
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Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiJ
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Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
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Position: -21
Score: 4.7 Sequence: AAACCAACCGTGGTTGGATC
Locus tag: Htur_1831
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Htur_1832
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD |
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATPase component BtuD
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Position: -58
Score: 4.7 Sequence: GATCCAACCACGGTTGGTTT
Locus tag: Htur_1830
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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Position: -66
Score: 4.4 Sequence: TGAGCAAGCGAACTTGCCTT
Position: -46
Score: 4.9 Sequence: ATACCAAACAAAATTGTTTT
Locus tag: Htur_0996
Name: cbiT Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Htur_0995
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Htur_0994
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
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cbiT
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Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiF
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Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
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Position: -9
Score: 4.6 Sequence: AGCGCAACTATGGTTGCAGA
Locus tag: Htur_1006
Name: chlID Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis |
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chlID
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ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
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Position: -229
Score: 5.3 Sequence: TTTACAACTATACTTGTTCT
Locus tag: Htur_5161
Name: cbtA Funciton: Predicted cobalt transporter CbtA
Locus tag: Htur_5162
Name: cbiX_2 Funciton: conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein) |
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cbtA
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Predicted cobalt transporter CbtA
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cbiX_2
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conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |