Profile of regulator CblR in Halobacteriales
Properties
| Regulator family: |
|
| Regulation mode: |
|
| Biological process: |
Cobalamin biosynthesis |
| Effector: |
|
| Regulog: |
CblR - Halobacteriales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Haloarcula marismortui ATCC 43049
|
|
rrnAC3005 |
cbiH |
-20 |
5.5 |
AGTACAAGCACAATTGTTTT |
|
rrnAC2998 |
cbiT |
-46 |
5.7 |
AATACAACCAAAATTGTTTT |
|
rrnAC3018 |
chlID |
-9 |
5.9 |
AATACAAGTATGGTTGTATT |
|
rrnAC3016 |
cbtB |
-39 |
5.1 |
TTTACAATCTTACTTGTTCT |
|
rrnAC3015 |
cbtA |
-245 |
5.1 |
TTTACAATCTTACTTGTTCT |
|
rrnAC3019 |
cobN |
-46 |
5.9 |
AATACAACCATACTTGTATT |
|
rrnAC3023 |
cbiD-II |
-37 |
5.4 |
AAAACAACTCAGCTTGTTTT |
|
Halobacterium salinarum R1
|
|
OE3207F |
cbiT |
-45 |
5.6 |
AATACAATCAAAATTGTTTT |
|
OE3242F |
cobT |
-120 |
4.8 |
AACCCAACTGTGGTTGCATA |
|
OE3229R |
chlID |
-9 |
5.5 |
ATTACAACTATGGTTGATTT |
|
OE3239R |
cbiD-II |
-44 |
4.8 |
TATGCAACCACAGTTGGGTT |
|
OE3230F |
cobN |
-45 |
5.5 |
AAATCAACCATAGTTGTAAT |
|
OE4346R |
nrdA1 |
-153 |
4.9 |
TGATCAACTTAGATTGTACT |
|
OE4346R |
nrdA1 |
-133 |
4.6 |
TCTACAAGTTTAGTTGGTAA |
|
OE3319R |
cbiM |
-69 |
5.2 |
AATACAAATTCAGTTGTTCT |
|
Halobacterium sp. NRC-1
|
|
VNG1550G |
cbiT |
-45 |
5.6 |
AATACAATCAAAATTGTTTT |
|
VNG1572C |
cobT |
-219 |
4.8 |
AACCCAACTGTGGTTGCATA |
|
VNG1565G |
chlID |
-9 |
5.5 |
ATTACAACTATGGTTGATTT |
|
VNG1570H |
cbiD-II |
-44 |
4.8 |
TATGCAACCACAGTTGGGTT |
|
VNG1566G |
cobN |
-240 |
5.5 |
AAATCAACCATAGTTGTAAT |
|
VNG2384G |
nrdA1 |
-153 |
4.9 |
TGATCAACTTAGATTGTACT |
|
VNG2384G |
nrdA1 |
-133 |
4.6 |
TCTACAAGTTTAGTTGGTAA |
|
VNG1635G |
cbiM |
-69 |
5.2 |
AATACAAATTCAGTTGTTCT |
|
Haloferax volcanii DS2
|
|
HVO_B0062 |
cbiT |
-123 |
5.1 |
AGAACAAGCGAGATTGTGTT |
|
HVO_B0062 |
cbiT |
-150 |
5 |
AAACCAAGCACAGTTGTAAA |
|
HVO_B0062 |
cbiT |
-47 |
5.4 |
ACAACAAGCACAATTGTTTT |
|
HVO_B0064 |
cbtA |
-227 |
5 |
TTTACAACTGTGCTTGGTTT |
|
HVO_B0063 |
cbtB |
-142 |
5.4 |
AAAACAATTGTGCTTGTTGT |
|
HVO_B0063 |
cbtB |
-66 |
5.1 |
AACACAATCTCGCTTGTTCT |
|
HVO_B0063 |
cbtB |
-39 |
5 |
TTTACAACTGTGCTTGGTTT |
|
Halomicrobium mukohataei DSM 12286
|
|
Hmuk_0145 |
VNG1577C |
-32 |
4.6 |
AGTTCAAGTGTGCTTGCGGT |
|
Hmuk_2791 |
btuF |
-60 |
4.1 |
GTTCCAACCACAGTTGGGAT |
|
Hmuk_1874 |
cbiT |
-46 |
5.7 |
AAAACAACCAAAATTGTTTT |
|
Hmuk_1860 |
chlID |
-9 |
5.5 |
AATACAAGCATGATTGATTT |
|
Hmuk_1861 |
cbtB |
-38 |
4.7 |
TTTACAATCTAGTTTGTACT |
|
Hmuk_1862 |
cbtA |
-229 |
4.7 |
TTTACAATCTAGTTTGTACT |
|
Hmuk_1859 |
cobN |
-45 |
5.5 |
AAATCAATCATGCTTGTATT |
|
Hmuk_2792 |
btuC |
-21 |
4.1 |
ATCCCAACTGTGGTTGGAAC |
|
Hmuk_1856 |
cbiD-II |
-36 |
5 |
AGTACAACTACACTTGTACC |
|
Hmuk_1856 |
cbiD-II |
-56 |
4.7 |
ATAGCAAGCACAATTGGTGT |
|
Hmuk_3351 |
nrdR |
-136 |
4.9 |
TAATCAAGTCTAATTGTACT |
|
Haloquadratum walsbyi DSM 16790
|
|
HQ1628A |
btuF |
-64 |
4.6 |
TATACAAACGCACTTGCAGT |
|
HQ1834A |
cbiT |
-47 |
5.3 |
AGAGCAAGCGTAATTGTTTT |
|
HQ1834A |
cbiT |
-113 |
5.5 |
AAAACAATTTTGCTTGTACT |
|
HQ3035A |
cbiG |
-107 |
5.3 |
AAGACAACCGTAATTGTTTT |
|
HQ2295A |
chlID |
-18 |
4.2 |
AGTGCAAAAAAGGTTGATAT |
|
HQ2298A |
cbiJ |
-236 |
4.3 |
GTTGCAACCCCGGTTGGATT |
|
HQ2296A |
cobN |
-45 |
4.2 |
ATATCAACCTTTTTTGCACT |
|
HQ1627A |
btuC |
-26 |
4.6 |
ACTGCAAGTGCGTTTGTATA |
|
HQ1835A |
cbiM |
-126 |
5.3 |
AAAACAATTACGCTTGCTCT |
|
HQ1835A |
cbiM |
-60 |
5.5 |
AGTACAAGCAAAATTGTTTT |
|
Halorhabdus utahensis DSM 12940
|
|
Huta_2494 |
btuF |
-59 |
4.6 |
ACGACAAGTTGAGTTGCATT |
|
Huta_2493 |
btuC |
-1 |
4.6 |
AATGCAACTCAACTTGTCGT |
|
Huta_2339 |
nrdR |
-133 |
5.1 |
AGTACAACTGAACTTGGACT |
|
Halorubrum lacusprofundi ATCC 49239
|
|
Hlac_3478 |
cbiT |
-46 |
5 |
AGCTCAACCAAAATTGTTTT |
|
Hlac_0880 |
btuF |
-58 |
4.3 |
TCTCCAACAAAACTTGTAGT |
|
Hlac_3464 |
cbtA |
-229 |
4.9 |
TTTACAAGCTCAGTTGTGTT |
|
Hlac_3463 |
cbtB |
-39 |
4.9 |
TTTACAAGCTCAGTTGTGTT |
|
Hlac_3462 |
chlID |
-9 |
5.4 |
ACTACAACCATGGTTGATTT |
|
Hlac_3458 |
cbiD-II |
-33 |
4.4 |
AGATAAAGTATAGTTGAACT |
|
Hlac_3461 |
cobN |
-45 |
5.4 |
AAATCAACCATGGTTGTAGT |
|
Hlac_2946 |
nrdR |
-136 |
5.5 |
AATACAAGTTTAGTTGTGTT |
|
Hlac_0881 |
btuC |
-24 |
4.3 |
ACTACAAGTTTTGTTGGAGA |
|
Haloterrigena turkmenica DSM 5511
|
|
Htur_0996 |
cbiT |
-46 |
4.9 |
ATACCAAACAAAATTGTTTT |
|
Htur_0996 |
cbiT |
-66 |
4.4 |
TGAGCAAGCGAACTTGCCTT |
|
Htur_1830 |
btuF |
-58 |
4.7 |
GATCCAACCACGGTTGGTTT |
|
Htur_5160 |
cbtB |
-37 |
5.3 |
TTTACAACTATACTTGTTCT |
|
Htur_5161 |
cbtA |
-229 |
5.3 |
TTTACAACTATACTTGTTCT |
|
Htur_1006 |
chlID |
-9 |
4.6 |
AGCGCAACTATGGTTGCAGA |
|
Htur_1005 |
cobN |
-45 |
4.6 |
TCTGCAACCATAGTTGCGCT |
|
Htur_1831 |
btuC |
-21 |
4.7 |
AAACCAACCGTGGTTGGATC |
|
Natrialba magadii ATCC 43099
|
|
Nmag_1837 |
btuF |
-58 |
4.9 |
AATGCAACTCTGATTGCAAT |
|
Nmag_3175 |
cbiA |
-115 |
4.4 |
AGTTCAAGTACAGTTGTGTG |
|
Nmag_3605 |
btuF |
-58 |
5 |
TGTGCAAGCATGATTGCTTT |
|
Nmag_2658 |
nrdR |
-136 |
4 |
AACACAAGTGAATTTTCACT |
|
Nmag_3606 |
btuC |
-22 |
5 |
AAAGCAATCATGCTTGCACA |
|
Natronomonas pharaonis DSM 2160
|
|
NP0736A |
cobT |
-33 |
4.1 |
GGTTCAAGTACACTTGTCCA |
|
NP0736A |
cobT |
-97 |
4.4 |
ACAGCAATTCGGCTTGTACA |
|
NP3814A |
btuF |
-57 |
4.2 |
GCTGCAACTGGGCTTGGTTT |
|
NP1116A |
cbiH |
-101 |
5.2 |
ACAACAAGCACAATTGTTAT |
|
NP1124A |
cbiT |
-46 |
5.3 |
AGCACAACCAAAATTGTTTT |
|
NP0736A |
cobT |
-117 |
5.4 |
TAATCAAGTATAGTTGTATT |
|
NP1094A |
chlID |
-29 |
4 |
TGATAAACTCCGGTTGTTCT |
|
NP1094A |
chlID |
-9 |
4.6 |
AATACAACCGTGATTGACAA |
|
NP1092A |
cobN |
-45 |
4.6 |
TTGTCAATCACGGTTGTATT |
|
NP1092A |
cobN |
-25 |
4 |
AGAACAACCGGAGTTTATCA |
|
NP3816A |
btuC |
-21 |
4.2 |
AAACCAAGCCCAGTTGCAGC |
|
NP0734A |
cbiD-II |
-27 |
5.4 |
AATACAACTATACTTGATTA |
|
NP0734A |
cbiD-II |
-47 |
4.4 |
TGTACAAGCCGAATTGCTGT |
|
NP6162A |
nrdR |
-117 |
4.3 |
ACACCAATTTTATTTGGAAA |
|
NP6162A |
nrdR |
-137 |
5 |
AAATCAAGTTCATTTGTACT |
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Regulatory Sites
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